jrotieno
Public Health | Phylodynamics | Bayesian inference | Virus Evolution | Disease ecology | Workforce Development
Kilifi, Kenya
Pinned Repositories
Kilifi_ON1_genomes
phyphy
Python HyPhy: Facilitating HyPhy execution and parsing
public_health_bacterial_genomics
rsv_phylogeography
seasonal_HCoV_origins
veclab.github.io
A website for the virus epidemiology and control group
viral-ngs-easy-install-and-snakemake
viral-ngs installation using easy-install and running the pipeline via snakemake
public_health_bacterial_genomics
public_health_viral_genomics
Bioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of viral pathogens of concern, especially SARS-CoV-2
jrotieno's Repositories
jrotieno/phyphy
Python HyPhy: Facilitating HyPhy execution and parsing
jrotieno/public_health_bacterial_genomics
jrotieno/seasonal_HCoV_origins
jrotieno/viral-ngs-easy-install-and-snakemake
viral-ngs installation using easy-install and running the pipeline via snakemake
jrotieno/Kilifi_ON1_genomes
jrotieno/rsv_phylogeography
jrotieno/veclab.github.io
A website for the virus epidemiology and control group