Pinned Repositories
CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
CATALYST
Cytometry dATa anALYsis Tools
CIPR-Package
Cluster Identity Predictor (R package implementation)
conga
Clonotype Neighbor Graph Analysis
CytofBatchAdjust
CytofRUV_edit
CytofRUV: Removing unwanted variation to integrate multiple CyTOF datasets.
DIALOGUE
DIALOGUE is a dimensionality reduction method that uses cross-cell-type associations to identify multicellular programs (MCPs) and map the cell transcriptome as a function of its environment.
FCSimple
scenith_app
seutools
miscellaneous functions to summarize seurat objects
jsim91's Repositories
jsim91/CATALYST
Cytometry dATa anALYsis Tools
jsim91/CIPR-Package
Cluster Identity Predictor (R package implementation)
jsim91/conga
Clonotype Neighbor Graph Analysis
jsim91/CytofBatchAdjust
jsim91/CytofRUV_edit
CytofRUV: Removing unwanted variation to integrate multiple CyTOF datasets.
jsim91/DIALOGUE
DIALOGUE is a dimensionality reduction method that uses cross-cell-type associations to identify multicellular programs (MCPs) and map the cell transcriptome as a function of its environment.
jsim91/FCSimple
jsim91/scenith_app
jsim91/seutools
miscellaneous functions to summarize seurat objects