Pinned Repositories
cryoCARE_T2T
Singularity image for cryo-CARE
DenoiSeg
Joint training of denoising and segmentation.
DivNoising
DivNoising is an unsupervised denoising method to generate diverse denoised samples for any noisy input image. This repository contains the code to reproduce the results reported in the paper https://openreview.net/pdf?id=agHLCOBM5jP
EmbedSeg
Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images
FourierImageTransformer
Fourier Image Transformer (FIT) can solve relevant image analysis tasks in Fourier space.
HDN
This repository hosts the code for HDN (associated with the paper https://arxiv.org/pdf/2104.01374.pdf) for pixel and structured noise removal for microscopy and natural image datasets
labkit-ui
Advanced Tool for Labeling And Segmentation
n2v
This is the implementation of Noise2Void training.
pn2v
This is our implementation of Probabilistic Noise2Void
PPN2V
Code Implementation for the publication "Fully Unsupervised Probabilistic Noise2Void"
JugLab's Repositories
juglab/n2v
This is the implementation of Noise2Void training.
juglab/EmbedSeg
Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images
juglab/pn2v
This is our implementation of Probabilistic Noise2Void
juglab/DenoiSeg
Joint training of denoising and segmentation.
juglab/PPN2V
Code Implementation for the publication "Fully Unsupervised Probabilistic Noise2Void"
juglab/labkit-ui
Advanced Tool for Labeling And Segmentation
juglab/HDN
This repository hosts the code for HDN (associated with the paper https://arxiv.org/pdf/2104.01374.pdf) for pixel and structured noise removal for microscopy and natural image datasets
juglab/cryoCARE_pip
PIP package of cryoCARE
juglab/napari-n2v
A self-supervised denoising algorithm.
juglab/featureforest
A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier
juglab/uSplit
juglab/labkit-pixel-classification
juglab/LabelEditor
juglab/labkit-command-line
Labkit Command Line - Segment huge images on a cluster
juglab/denoiSplit
juglab/MicroSSIM
Range Invariant SSIM
juglab/MultiOmicsCellSim
Cell Simulator to map parametrical distributions into various modalities
juglab/AI4LifeSubmissions
juglab/PyTr2d
Python based Tracking in 2D
juglab/bioimageio-uploader
juglab/cellpose-bmz-wrapper
A wrapper to pack cellpose model for bioimage model zoo
juglab/core-bioimage-io-python
Python libraries for loading, running and packaging bioimage.io models
juglab/core-bioimage-io-widgets
juglab/git_playground
juglab/howto-collector
juglab/MAESTER
Masked Autoencoder Guided Segmentation at Pixel Resolution
juglab/MicroSplit
Experiments for MicroSplit were done using this code.
juglab/motile
Multi-Object Tracker using Integer Linear Equations
juglab/solvathon_sorting
Sorting project(10)
juglab/versioning_fiji