Pinned Repositories
BDA_course_Aalto
Bayesian Data Analysis course at Aalto
blood
blood
dabrp_classnote2
ggmend
GGmend: A Mendelian randomization method for finding gene-on-gene regulatory effects in the presence of unobserved confounders
jjutil
jjutil
marsR
MARS: Leveraging allelic heterogeneity to increase power of association testing
rop
The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating from repeat sequences, recombinant B and T cell receptors, and microbial communities.
SKAT_NGS-2015
stfind
WGCNA_for_dupuytren
WGCNA analysis R code for Integrative Genomic and Transcriptomic Analysis of Genetic Markers in Dupuytren's Disease
junghyunJJ's Repositories
junghyunJJ/marsR
MARS: Leveraging allelic heterogeneity to increase power of association testing
junghyunJJ/ggmend
GGmend: A Mendelian randomization method for finding gene-on-gene regulatory effects in the presence of unobserved confounders
junghyunJJ/jjutil
jjutil
junghyunJJ/rop
The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating from repeat sequences, recombinant B and T cell receptors, and microbial communities.
junghyunJJ/stfind
junghyunJJ/WGCNA_for_dupuytren
WGCNA analysis R code for Integrative Genomic and Transcriptomic Analysis of Genetic Markers in Dupuytren's Disease
junghyunJJ/BDA_course_Aalto
Bayesian Data Analysis course at Aalto
junghyunJJ/blood
blood
junghyunJJ/cell_comp
junghyunJJ/covid_pipeline
junghyunJJ/datadriven
data_driven
junghyunJJ/deep_learning
junghyunJJ/findr-R
Standalone R package for findr
junghyunJJ/focus
FOCUS: Fine-mapping Of CaUsal gene Sets
junghyunJJ/gatkpipeline
junghyunJJ/gene_lists
List of gene lists for genomic analyses.
junghyunJJ/iterativeWGCNA
Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.
junghyunJJ/jaxopt
Hardware accelerated, batchable and differentiable optimizers in JAX.
junghyunJJ/junghyunJJ.github.io
A beautiful, simple, clean, and responsive Jekyll theme for academics
junghyunJJ/makesigmasemiPDRcppGSL
makesigmasemiPDRcppGSL
junghyunJJ/mnm
matrix normal model
junghyunJJ/mtag
Python command line tool for Multi-Trait Analysis of GWAS (MTAG)
junghyunJJ/multisc
junghyunJJ/qiime2
Official repository for the QIIME 2 framework.
junghyunJJ/recycle.RNA.seq
This project contains the links to the datasets, software and code that was used for our study "ROP: dumpster diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues"
junghyunJJ/rethinking-numpyro
Statistical Rethinking (2nd ed.) with NumPyro
junghyunJJ/shiny-examples
junghyunJJ/splmm
junghyunJJ/stancon_talks
Materials from Stan conferences
junghyunJJ/submission_checklist
A checklist to help you avoid all those minor errors when submitting a scientific manuscript