Picasso localize crashes when using simulated raw files
mb1069 opened this issue · 3 comments
mb1069 commented
- Picasso version: unknown
- Python version: 3.8.10
- Operating System: Ubuntu
Description
I simulated a dataset using a 3d PSF, and the simulated yaml file contains an unreadable entry which causes command picasso localize
to crash
What I Did
picasso localize -b 31 simulated_file.raw
Error message:
yaml.constructor.ConstructorError: could not determine a constructor for the tag 'tag:yaml.org,2002:python/object/apply:numpy.core.multiarray._reconstruct'
rafalkowalewski1 commented
Hey Miguel,
Can you please send me the .yaml file?
mb1069 commented
Hey Miguel,
Can you please send me the .yaml file?
Hi, here's a gist of the file as produced by picasso's simulation module
https://gist.github.com/mb1069/ca68e98849af5df5529cb88ba321d3d1
rafalkowalewski1 commented
Hey Miguel,
Thank you for the data. This is an error we have spotted recently too and it will be solved in the next release this/next week
Bests,
Rafal