Pinned Repositories
k-dominik's Repositories
k-dominik/ilastik
ilastik-shell, applets, and workflows to string them together.
k-dominik/Blender_for_Biologists_2023
k-dominik/conda-diff
Command line tool for conda environment comparison
k-dominik/conda-forge-pinning-feedstock
A conda-smithy repository for conda-forge-pinning.
k-dominik/covid-if-annotations
Annotation Tool for Immunofluorescence Assay Images
k-dominik/cp-convert
k-dominik/example_feature_plugin
Example plugin directly after using `cookiecutter gh:k-dominik/ilastik-oc-feats-cookiecutter`
k-dominik/ilastik-oc-feats-cookiecutter
cookiecutter for ilastik object feature plugins
k-dominik/ilastik-sphericaltexture
k-dominik/ImSwitch
ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of multiple microscope modalities.
k-dominik/jgo
Launch Java code from the CLI, installation-free. ☕
k-dominik/libdvid-cpp
C++ library for accessing DVID's REST API
k-dominik/list-of-update-sites
The update sites ImageJ2 knows about automatically
k-dominik/mobie-cmd
k-dominik/mobie-feedstock
A conda-smithy repository for mobie.
k-dominik/mobie-viewer-fiji
k-dominik/ome-zarr-feedstock
A conda-smithy repository for ome-zarr.
k-dominik/ome-zarr-py
Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
k-dominik/r2wars
An r2wars implementation I wrote 2018(?)
k-dominik/setup-miniconda-repro
k-dominik/simde
Implementations of SIMD instruction sets for systems which don't natively support them.
k-dominik/skimage_ilastik_oc_features
scikit image regionprops for ilastik as features in object classification
k-dominik/SphericalTexture
k-dominik/sphericaltexture-feedstock
A conda-smithy repository for sphericaltexture.
k-dominik/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
k-dominik/tiktorch
Wrappers for Pytorch
k-dominik/TrackMate-Ilastik
Using Ilastik pixel classifiers as detector for TrackMate.
k-dominik/vigra
a generic C++ library for image analysis
k-dominik/vigra-feedstock
A conda-smithy repository for vigra.
k-dominik/volumina
Volume Slicing and Editing