Pinned Repositories
dandi-archive
DANDI API server and Web app
dandi-cli
DANDI command line client to facilitate common operations
dandi-hub
Infrastructure and code for the dandihub
handbook
Handbook for interacting with the DANDI archive.
anki
Anki for desktop computers
bids-connectivity
bids-specification
Brain Imaging Data Structure (BIDS) Specification
bids-validator
Validator for the Brain Imaging Data Structure
bl_pipeline_python
Python data pipeline for BrodyLab
braincogs-automation-gui
GUI to register recordings in the automatic pipeline
kabilar's Repositories
kabilar/braincogs-pipeline-python
The python data pipeline defined with DataJoint for U19 projects
kabilar/CaImAn
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
kabilar/element-miniscope
DataJoint Element for Miniscope Imaging - NIH U24
kabilar/datajoint-docs-original
kabilar/datajoint-github
Organizational default configs for @datajoint repos
kabilar/datajoint-matlab
Relational data pipelines for the science lab
kabilar/datajoint-sciops-cicd
kabilar/datajoint-sciviz
Generic visualization framework for building dashboarding capabilities for DataJoint pipelines.
kabilar/element-animal
DataJoint Elements for Animal Management - U24 effort
kabilar/element-electrode-localization
kabilar/element-event
DataJoint Element for Experiment Event, Trial, & Block Management - NIH U24
kabilar/element-facemap
kabilar/element-lab
DataJoint element for lab management - U24 effort
kabilar/element-optogenetics
DataJoint Element for Optogenetics Experiments.
kabilar/element-session
DataJoint Element for Session - NIH U24
kabilar/element-visual-stimulus
kabilar/matplotlib
matplotlib: plotting with Python
kabilar/microns_phase3_nda
nda schema for MICrONS phase3
kabilar/mysql-docker
Docker image for mysql configured to work with DataJoint
kabilar/napari-docs
Documentation for napari (other than API docs)
kabilar/nobrainer-book
Tutorial and guides for the Nobrainer framework
kabilar/nobrainer-trained-models
Trained TensorFlow models for 3D image processing
kabilar/sbxreader
Reader for Neurolabware scanbox files
kabilar/VRrigs-documentation
kabilar/workflow-array-ephys
Full ephys pipeline using the elements-animal, elements-lab and elements-ephys
kabilar/workflow-calcium-imaging
Example DataJoint workflow for multi-photon calcium imaging analysis with CaImAn and Suite2p
kabilar/workflow-miniscope
kabilar/workflow-optogenetics
Example DataJoint workflow for optogenetics research
kabilar/workflow-session
Example usage of datajoint element animal
kabilar/workflow-zstack
Example DataJoint workflow for volumetric data analysis using BossDB