kalaivaniraju

kalaivaniraju's Stars

• NBISweden/nbis-meta

  A snakemake workflow for metagenomic projects

  Language:Python149

• PathwayCommons/biojs-pcviz

  BioJS component for PCViz

  Language:JavaScript63

• cmiranda16PonceHealthSciencesUniversity/biojs-pcviz-BioRegistry-Networks

  BioJS component for PCViz

  Language:JavaScript1

• PathwayMerger/PathMe-Viewer

  A web application for visualizing and exploring pathway knowledge in Biological Expression Language (BEL)

  Language:JavaScript63

• iVis-at-Bilkent/syblars

  SyBLaRS: Systems Biology Layout & Rendering Service

  Language:JavaScript121

• ComPath/ComPath

  A web application for exploring, analyzing, and curating pathway databases

  Language:JavaScript131

• iVis-at-Bilkent/newt

  A web application to visualize and edit pathway models

  Language:JavaScript5327

• kerseviciute/aPEAR

  Enrichment Networks for Pathway Enrichment Analysis

  Language:R419

• chanzuckerberg/cellxgene

  An interactive explorer for single-cell transcriptomics data

  Language:JavaScript649122

• interactivereport/cellxgene_VIP

  Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also performs differential gene expression analysis and provides a Command Line Interface (CLI) for advanced users to perform analysis using python and R.

  Language:HTML13547

• interactivereport/Quickomics

  Quickomics: exploring omics data in an intuitive, interactive and informative manner

  Language:R3910

• danielecook/Awesome-Bioinformatics

  A curated list of awesome Bioinformatics libraries and software.

  3.2k621

• Arcadia-Science/sourmashconsumr

  Working with the outputs of sourmash in R

  Language:Standard ML253

• fbreitwieser/pavian

  🌈 Interactive analysis of metagenomics data

  Language:R40378

• sourmash-bio/sourmash

  Quickly search, compare, and analyze genomic and metagenomic data sets.

  Language:Python48280

• bluenote-1577/sylph

  ultrafast taxonomic profiling and genome querying for metagenomic samples by abundance-corrected minhash.

  Language:Rust2017

• dalmolingroup/MEDUSA

  Metagenomic pipeline managed by snakemake

  Language:Python182

• Sydney-Informatics-Hub/Shotgun-Metagenomics-Analysis

  Analysis of metagenomic shotgun sequences including assembly, speciation, ARG discovery and more

  Language:Shell268