Pinned Repositories
BrainBox
BrainBox is a web application that let's you annotate and segment 3D brain imaging data in real time, collaboratively.
BrainBoxTutorials
This project aims at building special use case tutorials and refine a comprehensive documentation for our citizen science project BrainBox.
braingl
Automatically exported from code.google.com/p/braingl
braingl-three
braingl-web with three.js renderer
brainscapes
A generative model for primate brain shapes. (Poster OHBM 2020)
comparative-data
A repository of comparative data
connectivitySphere
Connectome in a Sphere
cortical-morphology-symposium
Symposium at OHBM 2021: Mapping cortical morphology in the human and non-human primate brain and relations to function
My-Random-Notebooks
Random iPython notebooks
volume
tool to work with volume data
katjaq's Repositories
katjaq/brainscapes
A generative model for primate brain shapes. (Poster OHBM 2020)
katjaq/BrainBox
BrainBox is a web application that let's you annotate and segment 3D brain imaging data in real time, collaboratively.
katjaq/comparative-data
A repository of comparative data
katjaq/cortical-morphology-symposium
Symposium at OHBM 2021: Mapping cortical morphology in the human and non-human primate brain and relations to function
katjaq/katjaq.github.io
website for my projects
katjaq/afids-macaca-ohbm2021
AFIDs: a standardized framework for evaluating anatomical correspondence between primate brains (Poster OHBM 2021)
katjaq/auralbrain
Aural Brain Representation Tools
katjaq/brain-tissues-segmentation
katjaq/brainhack_jupyter_book
A Jupyter Book of everything Brainhack: past, present and future.
katjaq/brainmuseum
katjaq/brainspell
brainspell is a web platform to facilitate the creation of an open, human-curated, classification of the neuroimaging literature
katjaq/foldgraph
Aims at making beautiful graphs from folds
katjaq/graphy
my website with some of my arty and art sciency projects, available here
katjaq/HDDI
Hypothesis-driven Diffusion Imaging
katjaq/igem-viz
Webpage reporting participation at the igem-ties study
katjaq/jydgets
Bidirectional jupyter widgets for neuroimaging and statistical analyses
katjaq/marching_cubes
A marching cubes implementation, using libigl
katjaq/meshgeometry
mesh geometry tools
katjaq/microdraw
Collaborative vectorial annotation tool for ultra high resolution data
katjaq/neurolibre_brainEvolution
Template repository for NeuroLibre preprint submissions.
katjaq/oh-bildungsreisen.github.io
Wir möchten Sie zu unseren Reisen auf den Spuren von Kultur, Sprachen und Land einladen. www.oh-bildungsreisen.de oder
katjaq/ohbm2020-posters
Centralized registry of Jitsi rooms for OHBM 2020 posters.
katjaq/P1NTS.github.io
Paris Île-de-France Neural Theory Symposium
katjaq/prime-re.github.io
The primary index for NHP-MRI processing tools and resources
katjaq/random-notebook-collection
keeping floating notebooks around
katjaq/reorient
A tool for reorienting and cropping MRI data
katjaq/sparkle
Sparkle Online Event Platform
katjaq/thresholdmann
A tool to apply a smoothly varying threshold to a nifti image
katjaq/tutorials-and-resources
A list of tutorials and other resources useful to learn open science and neuroimaging
katjaq/vrfiles
navigate your local files using VR