Pinned Repositories
autism
Data Challenge on Autism Spectrum Disorder detection
BrainBox
BrainBox is a web application that let's you annotate and segment 3D brain imaging data in real time, collaboratively.
BrainBoxTutorials
This project aims at building special use case tutorials and refine a comprehensive documentation for our citizen science project BrainBox.
braingl
Automatically exported from code.google.com/p/braingl
braingl-three
braingl-web with three.js renderer
brainscapes
A generative model for primate brain shapes. (Poster OHBM 2020)
comparative-data
A repository of comparative data
connectivitySphere
Connectome in a Sphere
cortical-morphology-symposium
Symposium at OHBM 2021: Mapping cortical morphology in the human and non-human primate brain and relations to function
volume
tool to work with volume data
katjaq's Repositories
katjaq/BrainBoxTutorials
This project aims at building special use case tutorials and refine a comprehensive documentation for our citizen science project BrainBox.
katjaq/volume
tool to work with volume data
katjaq/connectivitySphere
Connectome in a Sphere
katjaq/openMorph
Curated list of open-access databases with human structural MRI data
katjaq/ANTsTutorial
Guide to tutorial materials for ANTs/R
katjaq/BrainCatalogueWorkflow
Many scripts to process BrainCatalogue's data
katjaq/braingl-web
Automatically exported from code.google.com/p/braingl-web
katjaq/brainhack-paris.github.io
Brainhack Paris site
katjaq/continuousTesting
testing, mainly for python
katjaq/gdocs2md-html
Convert a Google Drive Document to a markdown.
katjaq/geometry-processing-introduction
Introductory assignment for Geometry Processing course
katjaq/global2017
webpage for Brainhack Global 2017
katjaq/hackathon2017
katjaq/hierarchical-models
A Visual Introduction to Hierarchical Modeling
katjaq/hyperelastic
Hyperelastic model plus growth
katjaq/kaleidoscope
A kaleidoscope for your images
katjaq/mesher
cgal's meshing algorithm
katjaq/metasearch
OpenNeuroLab MetaSearch App
katjaq/myNotebooks
my random compilation of Jupyter notebooks
katjaq/Neurogenesis
Simulation of different modes of cell division leading to neurogenesis
katjaq/nifti.js
katjaq/nihpd
Analyses of early postnatal human brain development
katjaq/nilearn
Machine learning for NeuroImaging in Python
katjaq/olm-whitepaper
Help improve this whitepaper to establish the framework for an Open Leadership Map.
katjaq/Screenshot-to-code-in-Keras
A neural network that transforms a screenshot into a static website
katjaq/structjs
A client-side wrapper for the npm struct package
katjaq/surfjs
a javascript surface viewer
katjaq/translucent
A translucent brain to display 3D data
katjaq/unfolder
Unfolder is a tool to unfold things, with a special focus on neuroimaging data unfolding
katjaq/vramonz2nii
conversion between vramonz and nii.gz