Pinned Repositories
assembly
An extensible framework for genome assembly.
bootstrap
data_api
Towards a unified data api for KBase
deploy_tools
deploy_tools
genome_annotation
The genome annotation service provides automated gene annotation based on the RAST system. This deploys both client and service components.
kb-ftp-api
kb_seed
The kb_seed module contains an import of a large body of code from the SEED project. These imports are performed on a periodic basis as new features developed on the SEED side are required in the KBase codebase. This deploys both client and service libraries.
kbase-data-thrift-js
Thrift JavaScript library modifications for the Data API
KBaseFBAModeling
Flux balance modeling service. Deploys both the client and service codes.
transform
A service that provides import, upload, and download capabilities as well as tools for validating and converting between data types, both internal and external to KBase.
kbaseattic's Repositories
kbaseattic/KBaseFBAModeling
Flux balance modeling service. Deploys both the client and service codes.
kbaseattic/bootstrap
kbaseattic/kb-ftp-api
kbaseattic/roadmap
Official roadmap for the KBase project
kbaseattic/ui-common
kbaseattic/design_docs
High level documents regarding the design and architecture of KBase
kbaseattic/KBaseRNASeq
kbaseattic/nextgen
Next generation of KBase documents and code experiments
kbaseattic/kbase-ui-plugin-bulk-ui
kbaseattic/KBaseKnowledgeEngine
kbaseattic/KBaseRelationEngine
kbaseattic/AWE
workflow and resource management system for bioinformatics data analysis
kbaseattic/awe_service
The awe_service repository provides KBase release engineering tools for the deployment of the AWE client and server. The AWE repository is included as a submodule in the awe_service repository and is maintained at http://github.com/MG-RAST/AWE.
kbaseattic/distro_utils
This module contains utility code and data used in the creation of KBase distributions.
kbaseattic/docs
kbaseattic/example_data
kbaseattic/feature_values
feature values
kbaseattic/handle_mngr
Provides user access capabilities to handles.
kbaseattic/invocation
The invocation service provides remote invocation of commands. A java script browser client for interactive remote invocation (IRIS) is included. This deploys the client, service and javascript web application.
kbaseattic/kbase-ui-plugin-datawidgets
kbaseattic/kbase-ui-plugin-jgi-import
kbaseattic/kbase-ui-plugin-methodview
Legacy viewers for narrative methods and apps
kbaseattic/kbase-ui-plugin-report-viewer
kbaseattic/kbase-ui-plugin-reske-search
A UI for RESKE Search - The Relation Engine - Search - Knowledge Engine
kbaseattic/kbase-ui-plugin-reske-simple-search
kbaseattic/kbase-ui-plugin-vis-widgets
kbaseattic/kbase_base
KBase Base Docker Image
kbaseattic/KBaseSearchAPI
Search API service to KBase Search Engine
kbaseattic/OntologyRelations
kbaseattic/shock_service
Enables deployment of shock server and clients within the kbase release environment