Pinned Repositories
assembly
An extensible framework for genome assembly.
bootstrap
data_api
Towards a unified data api for KBase
deploy_tools
deploy_tools
genome_annotation
The genome annotation service provides automated gene annotation based on the RAST system. This deploys both client and service components.
kb-ftp-api
kb_seed
The kb_seed module contains an import of a large body of code from the SEED project. These imports are performed on a periodic basis as new features developed on the SEED side are required in the KBase codebase. This deploys both client and service libraries.
kbase-data-thrift-js
Thrift JavaScript library modifications for the Data API
KBaseFBAModeling
Flux balance modeling service. Deploys both the client and service codes.
transform
A service that provides import, upload, and download capabilities as well as tools for validating and converting between data types, both internal and external to KBase.
kbaseattic's Repositories
kbaseattic/data_bootstrap
bootstrap for runtime data
kbaseattic/jnomics
kbaseattic/auth_lite
This is a C implementation of the authentication clients.
kbaseattic/auth_service
kbaseattic/auto-deploy
Module to instantiate auto-deploy during a standard build
kbaseattic/awe_monitor
Support for a pool of production awe clients
kbaseattic/awe_utils
A collection of utilities for working with AWE
kbaseattic/browse
This module provides a workspace browser for workspaces. The main component of this repository is the workspace browser app that is contained in the ui-common repository. This repository provides the necessary release engineering to deploy the workspace browser as an independent component.
kbaseattic/cdd_service
kbaseattic/integration_examples
A collection of examples showing how various modules work together. This is primarily used for training and learning.
kbaseattic/metadata
kbaseattic/prom_service
kbaseattic/protein_structure_service
kbaseattic/registry
The registry service provides a service registry for Services. This deploys both the client and the service.
kbaseattic/simple_fba
Simple wrappers around fba tools.
kbaseattic/strep_repeats
Detects Streptococcus repeats in genome sequences.
kbaseattic/workspace_service
This is the repository for managing the workspace service. The workspace represents a scientific team's data as a collection of objects with a standard set of permissions over all objects within a workspace. The workspace also implements revert and restore functionality on each object in a workspace.