kdkorthauer
Assistant Professor, University of British Columbia | Investigator, BC Children's Hospital Research Institute
University of British Columbia and BC Children's Hospital Research InstituteVancouver, BC | Canada
Pinned Repositories
benchmarkfdr-shiny
Shiny App for exploring results from "A practical guide to methods controlling false discoveries in computational biology"
cfMeDIPseq-RCC
Analyses for Manuscript "Sensitive detection of renal cell carcinoma using plasma and urine cell-free DNA methylomes"
dmrseq
R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing
dmrseqPaper
Code to reproduce results of the dmrseq paper
FestivalWorkshopVignettes
Vignette for Single-Cell workshop at Festival of Genomics California 2016
fungeno2019
repressivecapacity
Reanalysis of the repressive capacity of promoter DNA methylation
scDD
R package to identify genes with differential distributions in single-cell RNA-seq
korthauer-lab.github.io
Source code for Korthauer Lab website
kdkorthauer's Repositories
kdkorthauer/dmrseq
R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing
kdkorthauer/scDD
R package to identify genes with differential distributions in single-cell RNA-seq
kdkorthauer/cfMeDIPseq-RCC
Analyses for Manuscript "Sensitive detection of renal cell carcinoma using plasma and urine cell-free DNA methylomes"
kdkorthauer/repressivecapacity
Reanalysis of the repressive capacity of promoter DNA methylation
kdkorthauer/benchmarkfdr-shiny
Shiny App for exploring results from "A practical guide to methods controlling false discoveries in computational biology"
kdkorthauer/fungeno2019
kdkorthauer/FestivalWorkshopVignettes
Vignette for Single-Cell workshop at Festival of Genomics California 2016
kdkorthauer/dmrseqPaper
Code to reproduce results of the dmrseq paper
kdkorthauer/benchmark-fdr
Benchmarking study of recent covariate-adjusted FDR methods
kdkorthauer/annotatr
Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=annotatr.
kdkorthauer/available
Check if a package name is available to use
kdkorthauer/awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
kdkorthauer/BiocStickers
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
kdkorthauer/bsseq
Devel repository for bsseq
kdkorthauer/c-data-2017
kdkorthauer/DriverGenePathway
kdkorthauer/DriverGenePathway2
kdkorthauer/EuroBioc2018
European Bioconductor Meeting 2018
kdkorthauer/FDRreg
False discovery rate regression
kdkorthauer/kdkorthauer.github.io
Personal website (archived)
kdkorthauer/MADGiC
kdkorthauer/MCC
Collaboration with Cathy Wu - Merkel Cell Carcinoma
kdkorthauer/pheatmap
Pretty heatmaps
kdkorthauer/PR2017replicaton
kdkorthauer/project_2
kdkorthauer/rafalab.github.io
web page
kdkorthauer/rat_imprintome
kdkorthauer/simple_site
test repo for experimenting with github pages
kdkorthauer/SingleCellExperiment
Clone of the Bioconductor repository for the SingleCellExperiment package, see https://bioconductor.org/packages/devel/bioc/html/SingleCellExperiment.html for the official development version.
kdkorthauer/SummarizedBenchmark