kenscripts

kenscripts's Stars

• eriklindernoren/ML-From-Scratch

  Machine Learning From Scratch. Bare bones NumPy implementations of machine learning models and algorithms with a focus on accessibility. Aims to cover everything from linear regression to deep learning.

  Language:Python24k938734.6k

• shenwei356/seqkit

  A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

  Language:Go1.3k27437159

• chembl/chembl_webresource_client

  Official Python client for accessing ChEMBL API

  Language:Python3793211394

• const-ae/ggupset

  Combination matrix axis for 'ggplot2' to create 'UpSet' plots

  Language:R35373725

• daler/gffutils

  GFF and GTF file manipulation and interconversion

  Language:Python2891414878

• VCG/upset

  UpSet - Visualizing Intersecting Sets

  Language:JavaScript2282923665

• tseemann/barrnap

  :microscope: :leo: Bacterial ribosomal RNA predictor

  Language:Perl227105740

• rmhubley/RepeatMasker

  RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.

  Language:Perl226625049

• NBISweden/GAAS

  Genome Assembly and Annotation Service code

  Language:Perl202533646

• matchms/matchms

  Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.

  Language:Python1881335761

• gladstone-institutes/Bioinformatics-Workshops

  Workshops presented by the Gladstone Bioinformatics Core

  Language:HTML184232263

• ropensci/webchem

  Chemical Information from the Web

  Language:R1631922041

• kjenike/panagram

  Language:Python608143

• SchlossLab/MiSeq_WetLab_SOP

  5918225

• nadegeguiglielmoni/genome_assembly_tools

  List of genome assembly tools

  Language:Python51318

• mwang87/MassQueryLanguage

  The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry centric fashion.

  Language:Python3891149

• andreasmock/MetaboDiff

  Language:R305124

• ethanbass/chromConverter

  Parsers for chromatography data in R (HPLC-DAD/UV, GC-FID, MS)

  Language:R294213

• wkumler/RaMS

  R-based access to Mass-Spectrometry data

  Language:R227277

• libChEBI/libChEBIpy

  libChEBIpy: a Python API for accessing the ChEBI database

  Language:Python214184

• WandeRum/MVI-evaluation

  Missing value imputation and evaluation, especially for metabolomics data sets

  Language:R18126

• idrblab/NOREVA

  R Package for Systematic Optimization of Metabolomic Data Processing

  Language:R17063

• JamesJeffryes/pyclassyfire

  A python client for the ClassyFire API

  Language:Python15254

• AntonYuryev/ElsevierAPI

  This repository was built to generate datasets combining data from several Elsevier knowledgebases. Most recent ResnetAPI code will be uploaded here into ResnetAPI folder.

  Language:Python123

• khliland/baseline

  R package baseline

  Language:R9311

• BeanLabASU/metabimpute

  Language:R7311

• hpetren/chemodiv

  R package for analysing phytochemical data

  Language:R5111

• juuussi/impute-metabo

  Simulation studies on imputation of metabolomics data, implemented with R

  Language:R5223

• computational-chemical-biology/npmine

  Language:Jupyter Notebook4111

• shuzhao-li-lab/mass2chem

  From mass to chemistry - common utilities in interpreting mass spectrometry data

  Language:Python347