kevinschaper

kevinschaper's Stars

• monarch-initiative/ontogpt

  LLM-based ontological extraction tools, including SPIRES

  Language:Jupyter Notebook5811819573

• obophenotype/human-phenotype-ontology

  Ontology for the description of human clinical features

  Language:Makefile2862610.4k51

• ontodev/robot

  ROBOT is an OBO Tool

  Language:Java2591973573

• monarch-initiative/mondo

  Mondo Disease Ontology

  Language:Jupyter Notebook225103.6k53

• INCATools/ontology-development-kit

  Bootstrap an OBO Library ontology

  Language:Jinja2202252754

• monarch-initiative/koza

  Data transformation framework for LinkML data models

  Language:Python4725724

• monarch-initiative/phenomics-assistant

  LLM retrieval augmented generation agent for Monarch.

  Language:Python18

• monarch-initiative/monarch-app

  Monarch Initiative website and API

  Language:Vue16215104

• monarch-initiative/monarch-ingest

  Data ingest application for Monarch Initiative knowledge graph using Koza

  Language:Python14263071

• monarch-initiative/oai-monarch-plugin

  First pass at a thin wrapper around the Monarch API and ChatGPT plugin

  Language:Python132

• monarch-initiative/monarchr

  R package for easy access, manipulation, and analysis of Monarch KG data

  Language:R84271

• monarch-initiative/clingen-ingest

  Language:Python3

• monarch-initiative/cat-merge

  Tooling for merging individual source KGX files in the Monarch ingest pipeline

  Language:Python220281

• monarch-initiative/clinvar-ingest

  Language:Python240

• monarch-initiative/release-utils

  Utilities for generating tsv downloads, release diffs, and other reports from scigraph and solr

  Language:Python284

• monarch-initiative/uphenotizer

  Repo to manage some simple conversions of post composed phenotypes into dospd patterns.

  Language:Jupyter Notebook242

• ZFIN/zfin

  ZFIN Codebase

  Language:Java2512