Pinned Repositories
agr_pageview_popularity_calculator
Download google analytics data for Alliance of Genome Resources sites
agr_prototype
A Prototype for the Alliance of Genome Resources Web Portal
biolink-model
Schema and generated objects for biolink data model and upper ontology
biolink-model-pydantic
Pydantic dataclasses for the Biolink model
bioregistry
📮 An integrative registry of biological databases, ontologies, and nomenclatures.
ChristmasLights
ctd_ingest
flask_app_test
kevinschaper's Repositories
kevinschaper/agr_pageview_popularity_calculator
Download google analytics data for Alliance of Genome Resources sites
kevinschaper/biolink-model
Schema and generated objects for biolink data model and upper ontology
kevinschaper/biolink-model-pydantic
Pydantic dataclasses for the Biolink model
kevinschaper/bioregistry
📮 An integrative registry of biological databases, ontologies, and nomenclatures.
kevinschaper/ChristmasLights
kevinschaper/ctd_ingest
kevinschaper/flask_app_test
kevinschaper/genomic_data
kevinschaper/golr-loader
Convert SciGraph queries into json that can be loaded by Golr
kevinschaper/kg-phenio
A Graph for experiments doing ML on ontologies.
kevinschaper/kgx
KGX is a Python library for exchanging Knowledge Graphs
kevinschaper/kgx-to-neo4j-jenkins
kevinschaper/koza
Data ingest framework for the Biolink model
kevinschaper/monarch-app
Monarch web application and API
kevinschaper/monarch-file-server
Terraform, scripts, and documentation for the monarch public file server
kevinschaper/monarch-ingest-dagster-docker
kevinschaper/monarch-ingest-jenkins
kevinschaper/monarch-qc
WORK IN PROGRESS - new effort at implementing a QC Dashboard for the Monarch KG and Ingest
kevinschaper/monarch-ui
A modern web UI for revealing and understanding Monarch Initiative information.
kevinschaper/mondo
Mondo Disease Ontology
kevinschaper/oai-monarch-plugin
First pass at a thin wrapper around the Monarch API and ChatGPT plugin
kevinschaper/oakx-grape
Experimental OAK plugin for Grape
kevinschaper/obook
OBO Organized Knowledge: Training materials for becoming an OBO engineer
kevinschaper/orphanet-koza-transform
A quick one-off koza transform of Orphanet gene to disease data
kevinschaper/prefixcommons-py
Prefix commons python utlities
kevinschaper/pydanticgen-demo
A small demonstration of LinkML's pydantic code generator
kevinschaper/pyobo
📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
kevinschaper/semsimian
Simple rust implementation of semantic similarity
kevinschaper/tislab.org
Public-facing website for tislab.org
kevinschaper/universalizer
The KG-Hub Universalizer provides functions for knowledge graph cleanup and identifier normalization.