Pinned Repositories
CASTER
CASTER: Predicting Drug Interactions with Chemical Substructure Representation (AAAI 2020)
clinicalBERT
ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)
DeepPurpose
A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)
ml-genomics-resources
Machine Learning for Genomics and Therapeutics Resources (Cell Patterns)
MolTrans
MolTrans: Molecular Interaction Transformer for Drug Target Interaction Prediction (Bioinformatics)
SkipGNN
SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)
TDC
Therapeutics Commons: Artificial Intelligence Foundation for Therapeutic Science
TxGNN
TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design
conformalized-gnn
Uncertainty Quantification over Graph with Conformalized Graph Neural Networks (NeurIPS 2023)
GEARS
GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations
kexinhuang12345's Repositories
kexinhuang12345/DeepPurpose
A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)
kexinhuang12345/clinicalBERT
ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)
kexinhuang12345/MolTrans
MolTrans: Molecular Interaction Transformer for Drug Target Interaction Prediction (Bioinformatics)
kexinhuang12345/ml-genomics-resources
Machine Learning for Genomics and Therapeutics Resources (Cell Patterns)
kexinhuang12345/SkipGNN
SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)
kexinhuang12345/CASTER
CASTER: Predicting Drug Interactions with Chemical Substructure Representation (AAAI 2020)
kexinhuang12345/ESPF
Explainable Substructure Partition Fingerprint for Protein, Drug, and More (NeurIPS 19 LMRL Workshop)
kexinhuang12345/MolDesigner-Public
MolDesigner: Interactive Design of Efficacious Drugs with Deep Learning (NeurIPS 2020 Demo)
kexinhuang12345/DrugDataResource
Datasets for Drug Discovery and Development
kexinhuang12345/scGNN
scGNN: scRNA-seq Dropout Imputation via Induced Hierarchical Cell Similarity Graph
kexinhuang12345/drug-bert
Drug-BERT: Pre-training Drug Sub-structure Representation for Molecular Property Prediction
kexinhuang12345/data_process
TDC Data Processing Tracker
kexinhuang12345/experiment-data-llm
kexinhuang12345/github-issue-templates
:symbols: A collection of GitHub issue and pull request templates
kexinhuang12345/intro_ml_nyu
kexinhuang12345/anomaly-detection-resources
Anomaly detection related books, papers, videos, and toolboxes
kexinhuang12345/ApaperAday
A Paper A Day
kexinhuang12345/chemprop
Fast and scalable uncertainty quantification for neural molecular property prediction, accelerated optimization, and guided virtual screening.
kexinhuang12345/cs107test
kexinhuang12345/data_analysis
kexinhuang12345/GNNPapers
Must-read papers on graph neural networks (GNN)
kexinhuang12345/hub-docs
Frontend components, documentation and information hosted on the Hugging Face website.
kexinhuang12345/leetcode
kexinhuang12345/mitotic_spindle
kexinhuang12345/playground
kexinhuang12345/readthedocs.org
The source code that powers readthedocs.org
kexinhuang12345/robustness-gym
Robustness Gym: Evaluation Toolkit for NLP
kexinhuang12345/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
kexinhuang12345/toxic-comment-detection
kexinhuang12345/transformers
🤗Transformers: State-of-the-art Natural Language Processing for Pytorch and TensorFlow 2.0.