khigashi1987's Stars
OmicsML/awesome-deep-learning-single-cell-papers
nf-core/ampliseq
Amplicon sequencing analysis workflow using DADA2 and QIIME2
cmdcolin/awesome-genome-visualization
A list of interesting genome browser or genome-browser-like implementations
mdozmorov/HiC_tools
A collection of tools for Hi-C data analysis
theislab/scib
Benchmarking analysis of data integration tools
mercari/ml-system-design-pattern
System design patterns for machine learning
suzuki-shm/SPHERE
Synthetic PHasE Rate Estimator by single metagenome sequence
SugiharaLab/pyEDM
Python package of EDM tools
suzuki-shm/GRiD-in-cwl
Growth Rate Index Calculater wrapped by CWL
KrishnaswamyLab/SingleCellWorkshop
MotomuMatsui/gs
Graph Splitting Method
metagen/EEBIIC
Effect Estimator By Incident Interval Count
shap/shap
A game theoretic approach to explain the output of any machine learning model.
marcotcr/lime
Lime: Explaining the predictions of any machine learning classifier
pavlin-policar/openTSNE
Extensible, parallel implementations of t-SNE
pcyin/tranX
A general-purpose neural semantic parser for mapping natural language queries into machine executable code
gnes-ai/gnes
GNES is Generic Neural Elastic Search, a cloud-native semantic search system based on deep neural network.
suzuki-shm/fastANI-in-cwl
Wrapper tool of fastANI by CWL and Docker
marbl/MetaCompass
MetaCompass: Reference-guided Assembly of Metagenomes
CamDavidsonPilon/Probabilistic-Programming-and-Bayesian-Methods-for-Hackers
aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)
gtamazian/chromosomer
A reference-assisted assembly tool for producing draft chromosome sequences.
mkotha/WaveRNN
A WaveRNN implementation
pyg-team/pytorch_geometric
Graph Neural Network Library for PyTorch
HumanomeLab/mlcourse
生命情報の機械学習入門(新学術領域「先進ゲノム支援」中級講習会資料)