Pinned Repositories
CorrLDA
The C implementation for Correspondence latent Dirichlet allocation.
Hi-C_handson
Hi-C解析実習の資料。2019-11-15
Labeled-LDA
The C implementation of Labeled-LDA with collapsed gibbs sampling estimation.
MVNImputer
Matrix imputation by EM algorithm
OnlineLDA_ParticleFilter
Topic prediction of new documents with pre-learned LDA model by Particle filter posterior estimation.
pyEDM_Maizuru
pyEDMを使った生態学時系列データの因果推定
Python_PCoA
The Python implementation for Principal Coordinate Analysis
SAUCIE_PyTorch
PyTorch Implementation of SAUCIE Algorithm
scRNAseq_handson
PythonによるシングルセルRNA-seq解析。
VB-GMM
Variational bayesian model selection for Gaussian mixture model
khigashi1987's Repositories
khigashi1987/scRNAseq_handson
PythonによるシングルセルRNA-seq解析。
khigashi1987/Labeled-LDA
The C implementation of Labeled-LDA with collapsed gibbs sampling estimation.
khigashi1987/SAUCIE_PyTorch
PyTorch Implementation of SAUCIE Algorithm
khigashi1987/OnlineLDA_ParticleFilter
Topic prediction of new documents with pre-learned LDA model by Particle filter posterior estimation.
khigashi1987/VB-GMM
Variational bayesian model selection for Gaussian mixture model
khigashi1987/MVNImputer
Matrix imputation by EM algorithm
khigashi1987/pyEDM_Maizuru
pyEDMを使った生態学時系列データの因果推定
khigashi1987/Python_PCoA
The Python implementation for Principal Coordinate Analysis
khigashi1987/CorrLDA
The C implementation for Correspondence latent Dirichlet allocation.
khigashi1987/Hi-C_handson
Hi-C解析実習の資料。2019-11-15
khigashi1987/NGSHandson2017
khigashi1987/NMF
The C implementation of Nonnegative Matrix factorization using Itakura-Saito divergence criterion.
khigashi1987/ContentRelevanceModel
The C implementation of Content Relevance Model with collapsed gibbs sampling estimation.
khigashi1987/CUTRUN_Nextflow
CUT&RUN-seq analysis pipeline built using Nextflow.
khigashi1987/EU-NMF
The C implementation of Nonnegative Matrix factorization using Euclidean distance.
khigashi1987/flask_mysql_nginx
khigashi1987/GAMMA-GLM-C
The C implementation of gamma generalized linear model with MCMC parameter optimization.
khigashi1987/GAMMA_GLM
The Python implementation of Gamma generalised linear model with MCMC parameter optimization.
khigashi1987/GUniFrac
The Python implementation to compute Generalized UniFrac distance
khigashi1987/LDAPrediction
The C implementation for topic prediction of new documents using LDA model learned in advance.
khigashi1987/mvsLDA
supervised Latent Dirichlet Allocation for multivariate normal responses.
khigashi1987/Python_book
khigashi1987/Python_statistics
Python toolkit for multivariate analysis
khigashi1987/scanpy_handson
Scanpyを使ったscRNA-seq解析の実習資料。
khigashi1987/scanpy_handson_utokyolec2023
khigashi1987/scanpy_handson_utokyolec2024
khigashi1987/scRNAseq_handson_2023
khigashi1987/test_genome_tracks
khigashi1987/verbatim_search_chrome
chrome extension for verbatim google search
khigashi1987/vitcomic2
The stand-alone version of VITCOMIC2 (http://vitcomic.org/).