Pinned Repositories
Argos
R/shiny interface for interactive of data wrangling in TIPeR Project
kidneycellexplorer
microscope-utility
Automation workflow for Kim Lab Microscope.
nofold
Motif finder for RNA secondary structures
PESS
Full-scale protein fold recognition using 1NN
PIVOT
Platform for Interactive analysis and Visualization Of Transcriptomics data
Theia
R/shiny interface for Kim Lab RNA-seq Pipeline Quality Control
VERSE
A versatile and efficient RNA-Seq read counting tool
VisCello
Viscello for Visualization of Single Cell Data
VisCello.celegans
VisCello for C.elegans embryogenesis
Kim Lab's Repositories
kimpenn/PIVOT
Platform for Interactive analysis and Visualization Of Transcriptomics data
kimpenn/VisCello
Viscello for Visualization of Single Cell Data
kimpenn/VERSE
A versatile and efficient RNA-Seq read counting tool
kimpenn/kidneycellexplorer
kimpenn/nofold
Motif finder for RNA secondary structures
kimpenn/VisCello.celegans
VisCello for C.elegans embryogenesis
kimpenn/Theia
R/shiny interface for Kim Lab RNA-seq Pipeline Quality Control
kimpenn/Argos
R/shiny interface for interactive of data wrangling in TIPeR Project
kimpenn/microscope-utility
Automation workflow for Kim Lab Microscope.
kimpenn/PESS
Full-scale protein fold recognition using 1NN
kimpenn/chex-analysis
This repository contains code for CHEX-seq data analysis.
kimpenn/chex-seq
This is the computational pipeline for CHEX-seq data
kimpenn/Glo-DB
Genomic Locus Operations Database
kimpenn/jc-0324
kimpenn/resistant-fit-norm-bibe-2020
Supporting material and reproducing the experiments of the paper "Resistant Fit Regression Normalization for Single-cell RNA-seq Data" of BIBE 2020
kimpenn/smito-analysis
This repository contains code for SMITO data analysis
kimpenn/smito-pipeline
Single-MITOchondrion (SMITO) SNV Pipeline
kimpenn/Subspace
kimpenn/aegle_patch_viewer
kimpenn/PIC-snATAC
A package for Paired Insertion Counting for snATAC-seq data.