kipoi/kipoi-containers
This repository contains necessary infrastructure elements for automatically adding and updating docker and singularity images for models and model groups in Kipoi model zoo. These images are pre-activated with a compatible conda environment where all the model (group) specific dependencies have been installed.
PythonMIT
Issues
- 0
Add logging mechanism
#145 opened by haimasree - 0
Remove spython
#130 opened by haimasree - 0
Bug with deleting a file while updating existing singularity images to zenodo
#127 opened by haimasree - 0
- 3
Reduce size of docker images
#4 opened by haimasree - 0
Handling periodic update of jsons in model repo
#113 opened by haimasree - 0
- 0
Issue with slow update
#107 opened by haimasree - 0
- 0
- 0
Add native support for singularity containers
#68 opened by haimasree - 0
Move the docker images to kipoi dockerhub repo
#39 opened by haimasree - 2
Address issue with github read only token
#50 opened by haimasree - 0
Docker support for epidermal-basset model
#49 opened by haimasree - 0
Bug while syncing with model repo
#45 opened by haimasree - 0
Replace anaconda with conda-forge
#42 opened by haimasree - 1
Combine build-test-images and release-workflow
#28 opened by haimasree - 0
Add an automated way of updating (build and test, potentially push if tests pass) docker containers if kipoi is updated in pypi
#24 opened by haimasree - 0
Add new DeepMEL models
#25 opened by haimasree - 0
- 0
Automate addition/update of new/existing model containers to keep in sync with kipoi models repo
#17 opened by haimasree - 0
Add support for singularity containers
#5 opened by haimasree - 0
Add SeqVec
#9 opened by haimasree - 0
- 0
- 0