Pinned Repositories
AlphaSynuclein
copied-io-2013-slides
Personal modifications to Google IO 2013 HTML slide generator
cutadapt
cutadapt removes adapter sequences from sequencing reads
FitEnsemble
HMCNotes
openmoltools
repex
Python replica-exchange simulation facility for OpenMM.
kyleabeauchamp's Repositories
kyleabeauchamp/HMCNotes
kyleabeauchamp/addons
Useful extra functionality for TensorFlow maintained by SIG-addons
kyleabeauchamp/arviz
Exploratory analysis of Bayesian models with Python
kyleabeauchamp/bioconda-recipes
Conda recipes for the bioconda channel.
kyleabeauchamp/bioconda-utils
Utilities for building and managing bioconda recipes
kyleabeauchamp/bioconda.github.io
Bioconda is a distribution of bioinformatics software realized as a channel for the versatile package manager Conda.
kyleabeauchamp/bioconda_fast
kyleabeauchamp/bwa
Burrow-Wheeler Aligner for pairwise alignment between DNA sequences
kyleabeauchamp/cnvkit
Copy number variant detection from targeted DNA sequencing
kyleabeauchamp/dash-core-components
A dash component starter pack :stars:
kyleabeauchamp/dbt
dbt (data build tool) enables data analysts and engineers to transform their data using the same practices that software engineers use to build applications.
kyleabeauchamp/docs
TensorFlow documentation
kyleabeauchamp/edward
A library for probabilistic modeling, inference, and criticism. Deep generative models, variational inference. Runs on TensorFlow.
kyleabeauchamp/lifelines-feedstock
A conda-smithy repository for lifelines.
kyleabeauchamp/metabase
The simplest, fastest way to get business intelligence and analytics to everyone in your company :yum:
kyleabeauchamp/openmm
OpenMM is a toolkit for molecular simulation using high performance GPU code.
kyleabeauchamp/openmmtools
Test systems for OpenMM
kyleabeauchamp/pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
kyleabeauchamp/probability
Probabilistic reasoning and statistical analysis in TensorFlow
kyleabeauchamp/pymc-feedstock
A conda-smithy repository for pymc.
kyleabeauchamp/pymc3
Probabilistic Programming in Python. Uses Theano as a backend, supports NUTS and ADVI.
kyleabeauchamp/pymc4
A high-level probabilistic programming interface for TensorFlow Probability
kyleabeauchamp/pysam
Pysam is a python module for reading and manipulating Samfiles. It's a lightweight wrapper of the samtools C-API. Pysam also includes an interface for tabix.
kyleabeauchamp/SolutionFFBench
kyleabeauchamp/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
kyleabeauchamp/stor
A cross-compatible CLI and Python API for accessing block and object storage
kyleabeauchamp/tensorflow
An Open Source Machine Learning Framework for Everyone
kyleabeauchamp/tensorflow-feedstock
A conda-smithy repository for tensorflow.
kyleabeauchamp/Theano-PyMC
Theano-PyMC is a fork of the Theano library maintained by the PyMC developers
kyleabeauchamp/volume-backup
docker volume backup & restore utility