Minerva

Check out the Minerva website for tutorials, example Minerva Stories and frequently asked questions about Minerva.

We also published a paper describing Minerva Story and Author: Hoffer et al., (2020). Minerva: a light-weight, narrative image browser for multiplexed tissue images. Journal of Open Source Software, 5(54), 2579, https://doi.org/10.21105/joss.02579 .

Minerva Repository Structure

Minerva Story

The GitHub Pages site build is stored at minerva-story. The source code for the minified bundle is stored at minerva-browser.

Minerva Author

The Python Flask server along with automated testing is stored at minerva-author. The React UI is stored at minerva-author-ui

Running Minerva Story

Clone repository

git clone git@github.com:labsyspharm/minerva-story.git
cd minerva-story

Install npm

Download and install Node.js for your platform.

Install npx to run the http-server:

npm install -g npx

Run local server

In the project folder, run command:

npx http-server -p 8000

Open browser to localhost:8000

Rebuilding minerva-browser

If you update the version of Minerva Browser in package.json, you will need to rebuild with webpack as shown below:

npm i
npm run build

Then you can run the local server with npx http-server -p 8000 as normal.