lakhanp1
Bioinformatician. Pathogen pangenomics and ML.
Wageningen University & ResearchWageningen, Netherlands
Pinned Repositories
21_ULAS_AN
A. nidulans KERS complex ChIPseq data analysis scripts
23_SM_OE_project
33_Ana_CPE_crzA
Data analysis for caspofungin paradoxical effect in A. fumigatus.
38_ZhuBO_RNAseq4_DKO
39_Ben_RNAseq2_Tet
Tet and ADTet RNAseq data analysis for Ben Ko, HK PolyU
chipmine
R package for exploratory analysis of ChIPseq data
fungal_resources
R AnnotationDB resources like org.db, tx.db for various fungal species
markPeaks
Genomic regions (e.g ChIPseq peaks) annotation with TxDB object
omics_utils
util scripts for various omics data analysis
Pectobacterium_pangenome
Pectobacterium spp. pangenome analysis to understand the evolution of new virulent lineage in the Netherlands
lakhanp1's Repositories
lakhanp1/21_ULAS_AN
A. nidulans KERS complex ChIPseq data analysis scripts
lakhanp1/38_ZhuBO_RNAseq4_DKO
lakhanp1/39_Ben_RNAseq2_Tet
Tet and ADTet RNAseq data analysis for Ben Ko, HK PolyU
lakhanp1/fastqc_cutadpt
lakhanp1/39_ZhuBO_RNAseq5_ApoE_diet
lakhanp1/biofun
lakhanp1/codeGladiators
All programs I wrote for Code Gladiators 2015 programing contest in India.
lakhanp1/KERS_analysis
lakhanp1/RglT_analysis
lakhanp1/RosalindCodes
This repository has codes for Bioinformatics problems from ROSALIND: http://rosalind.info/about/