lakhanp1
Bioinformatician. Pathogen pangenomics and ML.
Wageningen University & ResearchWageningen, Netherlands
Pinned Repositories
21_ULAS_AN
A. nidulans KERS complex ChIPseq data analysis scripts
23_SM_OE_project
33_Ana_CPE_crzA
Data analysis for caspofungin paradoxical effect in A. fumigatus.
38_ZhuBO_RNAseq4_DKO
39_Ben_RNAseq2_Tet
Tet and ADTet RNAseq data analysis for Ben Ko, HK PolyU
chipmine
R package for exploratory analysis of ChIPseq data
fungal_resources
R AnnotationDB resources like org.db, tx.db for various fungal species
markPeaks
Genomic regions (e.g ChIPseq peaks) annotation with TxDB object
omics_utils
util scripts for various omics data analysis
Pectobacterium_pangenome
Pectobacterium spp. pangenome analysis to understand the evolution of new virulent lineage in the Netherlands
lakhanp1's Repositories
lakhanp1/fungal_resources
R AnnotationDB resources like org.db, tx.db for various fungal species
lakhanp1/chipmine
R package for exploratory analysis of ChIPseq data
lakhanp1/omics_utils
util scripts for various omics data analysis
lakhanp1/23_SM_OE_project
lakhanp1/33_Ana_CPE_crzA
Data analysis for caspofungin paradoxical effect in A. fumigatus.
lakhanp1/bioinformatics_notes
Some notes while doing genomics data analysis
lakhanp1/Pectobacterium_pangenome
Pectobacterium spp. pangenome analysis to understand the evolution of new virulent lineage in the Netherlands
lakhanp1/proj_colab
lakhanp1/500-AI-Machine-learning-Deep-learning-Computer-vision-NLP-Projects-with-code
500 AI Machine learning Deep learning Computer vision NLP Projects with code
lakhanp1/AI-For-Beginners
12 Weeks, 24 Lessons, AI for All!
lakhanp1/annotated_deep_learning_paper_implementations
🧑🏫 60 Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), gans(cyclegan, stylegan2, ...), 🎮 reinforcement learning (ppo, dqn), capsnet, distillation, ... 🧠
lakhanp1/build-your-own-x
Master programming by recreating your favorite technologies from scratch.
lakhanp1/CL_bioinfo_training
lakhanp1/collab_workshop
Forking Catarina's repo
lakhanp1/covid19_Mick_et_al.ML
lakhanp1/cs-video-courses
List of Computer Science courses with video lectures.
lakhanp1/javascript-algorithms
📝 Algorithms and data structures implemented in JavaScript with explanations and links to further readings
lakhanp1/KERS_project
kdmB-ecoA-rpdA-sntB chromatin modification complex ChIPseq data analysis
lakhanp1/machine-learning-for-software-engineers
A complete daily plan for studying to become a machine learning engineer.
lakhanp1/ML-For-Beginners
12 weeks, 26 lessons, 52 quizzes, classic Machine Learning for all
lakhanp1/oh-my-posh
A prompt theme engine for any shell.
lakhanp1/paper-qa
LLM Chain for answering questions from documents with citations
lakhanp1/phylogenetic_biology
Phylogenetic biology book forked from caseywdunn
lakhanp1/planets
lakhanp1/sentencepiece
Unsupervised text tokenizer for Neural Network-based text generation.
lakhanp1/temperature_plotting
lakhanp1/temperature_plotting-1
lakhanp1/TheAlgorithms-CPP
Collection of various algorithms in mathematics, machine learning, computer science and physics implemented in C++ for educational purposes.
lakhanp1/TheAlgorithms-Java
All Algorithms implemented in Java
lakhanp1/TheAlgorithms-Python
All Algorithms implemented in Python