lanagarmire

Pinned Repositories

Asgard
Language:R40 2 1420
COVID19-Drugs-LungInjury
Language:R7 2 01
cox-nnet
Language:Python47 4 016
deepimpute
An accurate and efficient deep learning method for single-cell RNA-seq data imputation
Language:Python87 7 2827
DeepProg
Deep-Learning framework for multi-omic and survival data integration
Language:Python79 4 521
Granatum
Language:R20 4 1411
lilikoi
Language:Jupyter Notebook9 4 68
NMFEM
Language:R15 6 26
Single-cell-drug-repositioning
Language:R14 2 67
SSrGE
Language:Python33 4 119

lanagarmire's Repositories

lanagarmire/cox-nnet
Language:Python47 4 016
lanagarmire/NMFEM
Language:R15 6 26
lanagarmire/MirMark
Home of the MirMark codebase
Language:Perl4 3 11
lanagarmire/epiPredictor
Language:R3 2 02
lanagarmire/NMFEM_extra
Additional code for NMFEM
Language:R13
lanagarmire/caffe
Caffe: a fast open framework for deep learning.
Language:C++
lanagarmire/czi-rfa
Application to "Collaborative Computational Tools for the Human Cell Atlas" https://chanzuckerberg.com/initiatives/rfa
lanagarmire/deep-review
A collaboratively written review paper on deep learning, genomics, and precision medicine
Language:CSS2 0
lanagarmire/dotfiles
Language:VimL
lanagarmire/epigenome_regulation
Language:R2 01
lanagarmire/evil-visualstar
Start a * or # search from the visual selection
Language:Emacs Lisp2 0
lanagarmire/HCC_genetics
2 0
lanagarmire/methyLiftover
A utility to map bisulfite sequencing data to the Illumina 450K methylation CpG set
Language:R1 0
lanagarmire/scImpute_mod
Language:R2 0
lanagarmire/WebMirMark
The web interface for MirMark, a microRNA target prediction algorithm.
2 0