laurajohanne

Pinned Repositories

• scenicplus

  SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) and single-cell chromatin accessibility (scATAC-seq) data.

  Language:Jupyter Notebook18229

• pycisTopic

  pycisTopic is a Python module to simultaneously identify cell states and cis-regulatory topics from single cell epigenomics data.

  Language:Jupyter Notebook5712

• ArchRtoSignac

  An R package performing object conversion from ArchRProject (ArchR) to Signac SeuratObject (Signac)

  Language:R3211

laurajohanne's Repositories