laylagerami

Chief Data Science Officer @IgnotaLabs

Ignota LabsCambridge, UK

Pinned Repositories

LINCS-Extraction
Command line extraction of the NIH LINCS L1000 data and other functionalities
Language:Python2 4 03
PIDGINv4
PIDGINv4
Language:Python10 4 35
RDKit-Tutorial
RDKit tutorial
Language:Jupyter Notebook2 4 00
addenbrookes_project
Renan and Layla's Addenbrooke's Project Files - Designing a selective and potent PDGFR-alpha inhibitor for fluorescent tagging and use as a PET tracer
Language:Batchfile0 2 20
blockchain-tutorial
Language:Jupyter Notebook0 2 00
CARNIVAL
CAusal Reasoning for Network Identification with integer VALue programming in R
Language:R01
CausalReasoningBenchmark
Scripts from the causal reasoning benchmarking paper
Language:R0 2 00
ConsensusTME
ConsensusTME Gene Sets and R Script
Language:R0 1 00
MAVEN
Elucidate and visualise a compound's mechanism of action by combining structure-based target prediction with gene expression-based causal reasoning, plus pathway enrichment to put results into biological context. GUI-based (minimal coding experience required).
Language:R12 3 10
PhDPapers
Papers of interest plus definitions required to understand the paper contents
1 3 00

laylagerami/MAVEN
Elucidate and visualise a compound's mechanism of action by combining structure-based target prediction with gene expression-based causal reasoning, plus pathway enrichment to put results into biological context. GUI-based (minimal coding experience required).
Language:R12 3 10
laylagerami/PhDPapers
Papers of interest plus definitions required to understand the paper contents
1 3 00
laylagerami/addenbrookes_project
Renan and Layla's Addenbrooke's Project Files - Designing a selective and potent PDGFR-alpha inhibitor for fluorescent tagging and use as a PET tracer
Language:Batchfile0 2 20
laylagerami/blockchain-tutorial
Language:Jupyter Notebook0 2 00
laylagerami/CARNIVAL
CAusal Reasoning for Network Identification with integer VALue programming in R
Language:R01
laylagerami/CausalReasoningBenchmark
Scripts from the causal reasoning benchmarking paper
Language:R0 2 00
laylagerami/ConsensusTME
ConsensusTME Gene Sets and R Script
Language:R0 1 00
laylagerami/ECHA-workshop
Data required for the ECHA workshop on in silico toxicity predictions
laylagerami/EPA
Language:HTML
laylagerami/HarvardX_Files
HarvardX files
Language:HTML1 0
laylagerami/hello-world
My first repository
1 0
laylagerami/rpdr-favorite-picker
Favorite picker of the RPDR Queens! All credit goes to https://github.com/antialiasis/favorite-picker
Language:JavaScript2 0
laylagerami/swirl
swirl files
Language:R
laylagerami/WNN_MoA
Language:Jupyter Notebook2 0