Issues
- 11
diaPASEF first tests
#123 opened by KlemensFroehlich - 5
- 5
[Feature Request] Sage output as a pepXML file
#130 opened by sciordia - 2
Using Sage for HLA Peptides
#139 opened by theGreatHerrLebert - 1
Random questions regarding splitting mgfs, specifying charge states, multiple possible precursors....
#138 opened by gsaxena888 - 1
Unintuitive behaviour of the 'precursor_charge' setting in the .json config.
#137 opened by MatteoLacki - 0
allowed customised mass offset for open search?
#136 opened by daichengxin - 7
Decharged precursors and tolerance
#132 opened by glormph - 2
Input handling guardrails and glob expansion
#133 opened by acesnik - 1
fatal runtime error: stack overflow
#131 opened by picciama - 1
Segmentation fault (core dumped)
#129 opened by colinliuzelin - 4
Sage TSV output notes
#127 opened by douweschulte - 3
How does the static modification work when the initial generation of fragments and peptides?
#126 opened by Wonyeop - 4
Search using parquet files
#125 opened by prvst - 5
No IMS model ran mzML input
#117 opened by patrick-willems - 0
Can't read mgfs with upper cases in path
#124 opened by jens-decker-bruker - 2
Differences between TSV and Parquet results.sage output
#118 opened by RalfG - 3
entrapment FASTA
#121 opened by KlemensFroehlich - 3
thread panicked
#122 opened by KlemensFroehlich - 13
Support for tims tof data
#73 opened by tomthun - 5
TMT11 quantification on MS2 level?
#82 opened by ningzhibin - 1
Bruker Support
#116 opened by treitpeter - 2
Support for Fragment-able Modifications
#115 opened by FriedLabJHU - 10
- 7
Support for feature extraction
#81 opened by TheLostLambda - 2
Support for mgf
#112 opened by ypriverol - 1
- 1
Supporting MGF format
#104 opened by yujinjeong2 - 5
- 4
.pin file not opening in percolator
#107 opened by jordancurrie - 1
Semi-enzymatic digests not completing?
#106 opened by hbarsnes - 5
- 2
- 7
Python bindings for sage-core library
#100 opened by theGreatHerrLebert - 3
Unspecific HLA datasets
#99 opened by karimwh - 0
Semi-enzymatic peptide generation
#92 opened by FriedLabJHU - 4
Restrict enzyme in multiple AA
#90 opened by ypriverol - 2
Single charged precursors?
#95 opened by patrick-willems - 2
- 9
Verbose, the process of running
#86 opened by ypriverol - 2
- 2
- 2
- 4
Support compiling to WebAssembly
#77 opened by TheLostLambda - 1
Supports for cross-linking searching?
#79 opened by yanze039 - 11
LFQ output is empty
#74 opened by tomthun - 5
- 8
Convert mgf to mzml
#76 opened by gsaxena888 - 1
Output more than a single peptide for a scan
#75 opened by gsaxena888 - 3
Problem analysing tims-tof data
#72 opened by tomthun