leeanapeters

Pinned Repositories

• pySCENIC

  pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.

  Language:Python43118537179

• scTFH

  Single cell analysis of follicular T cells

  Language:R01

• GeNA

  Genotype-Neighborhood Associations: A tool for identifying genetic variant associations to the abundance of cell states in single-cell datasets

  Language:Jupyter Notebook101131

• seurat

  R toolkit for single cell genomics

  Language:R2.3k738k910

• DeepTCR

  Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data

  Language:Jupyter Notebook113125040

leeanapeters's Repositories