Pinned Repositories
Analysis-with-Programming
Repository of my blog
ART_For_Temporary_Residents
Impact of providing ART to PLHIV who are ineligible for Medicare in Australia
Australian_HBV_model
capitalIn21stCenturyinR
Piketty in R
Chlamydia_incidence_model
This project contains the code for a model to estimate trends in chlamydia incidence in Australia.
Leek_Analysis_Replication
wsl-config
My personal Windows Subsystem for Linux (WSL) config and script files
Cascade_calculations
Australian diagnosis and care cascade calculations
Cascade_Incidence
Estimating the contribution of each step of the HIV cascade to new infections
covid19-closed-pop-models
Spreadsheet models of COVID-19 in prisons and other closed population settings
leftygray's Repositories
leftygray/Chlamydia_incidence_model
This project contains the code for a model to estimate trends in chlamydia incidence in Australia.
leftygray/Leek_Analysis_Replication
leftygray/wsl-config
My personal Windows Subsystem for Linux (WSL) config and script files
leftygray/Analysis-with-Programming
Repository of my blog
leftygray/ART_For_Temporary_Residents
Impact of providing ART to PLHIV who are ineligible for Medicare in Australia
leftygray/Australian_HBV_model
leftygray/capitalIn21stCenturyinR
Piketty in R
leftygray/covasim
COVID-19 Agent-based Simulator (Covasim): a model for exploring coronavirus dynamics and interventions
leftygray/datasharing
The Leek group guide to data sharing
leftygray/dirp
A bash script for managing dirs, pushd, and popd across terminals and systems.
leftygray/epiforecasts.github.io
central website
leftygray/EpiNow
Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
leftygray/EpiNow2
Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
leftygray/Evaluation_Modeling_Scripts
leftygray/firstpaper
leftygray/HCV_prison_model
A mathematical model for simulating HCV treatment and prevention programs in the prison setting.
leftygray/labs
Rmd source files for the HarvardX series PH525x
leftygray/LeftysRpkg
Personal R package containing functions I find useful day to day (under development)
leftygray/LeftysRstuff
Personal Rstudio and R files for personal use
leftygray/PrEPSTI
Individual-based, site-specific simulator of STI transmission
leftygray/readingpapers
A guide to reading scientific papers
leftygray/reviews
Writing reviews of academic papers
leftygray/rpackages
R package development - the Leek group way!
leftygray/scholmd
Learn how to use scholarly markdown
leftygray/SEI-SEIR_Arboviruses
Climate-based mechanistic model of arbovirus transmission in Ecuador and Kenya.
leftygray/talkguide
The Leek Group Guide to Giving Talks