lehtiolab/msstitch

Issues

• Mixed tmt16-18 bug, msslookup storequant crashes on multiple different isobaric types

  #13 opened 10 months ago by glormph
  1

• Stop codons are ignored when trypsinizing

  #12 opened a year ago by glormph
  0

• make possible to calculate FDR on split/filtered percolator data

  #10 opened a year ago by glormph
  1

• remove PSMs that have missing protein matches, peptides with missing PSMs

  #11 opened a year ago by glormph
  1

• Storing sequences with `storeseq --fullprotein` is slow, takes a lot of memory

  #8 opened a year ago by glormph
  1

• When first PSM has no isoquant, this crashes

  #9 opened a year ago by glormph
  1

• peptide table could have columns for bare peptide, and protein start, stop sites of peptide

  #5 opened a year ago by glormph
  1

• add full fasta header to description if unknown format

  #6 opened a year ago by glormph
  1

• output paramerer for msslookup

  #4 opened 4 years ago by husensofteng
  2

• Normalizing-median calculation incorrect when not using --norm-ratios

  #1 opened 7 years ago by glormph
  0