lengfei5
Senior Bioinformatician & Computational Biologist at @imp Vienna. PhD in Physics @univ-lille, postdoc in Computational Systems Biology @epfl
IMPVienna
Pinned Repositories
lengfei5's Repositories
lengfei5/atac_seq
atac_seq pipeline
lengfei5/axolotl_annotation
lengfei5/Bio-image_Analysis_with_Python
lengfei5/bone_healing_CSD
lengfei5/heart_regeneration
lengfei5/limbRegeneration_scRNA
lengfei5/organoid_patterning
lengfei5/positional_memory
lengfei5/RA_competence
lengfei5/chipseq
lengfei5/DeepSTARR
Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Drosophila melanogaster S2 cells
lengfei5/functions
lengfei5/GAAS
Genome Assembly and Annotation Service code
lengfei5/GachonProt
lengfei5/GenomeAnnotation
Best practices and workflow for genome annotation
lengfei5/nf_atacseq
lengfei5/nf_visium_kallisto
lengfei5/ngs_tools_ii2
lengfei5/organoid_regulomes
Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids
lengfei5/pallium_evo
Analysis of axolotl pallium gene expression data in the context of evolution and neurogenesis
lengfei5/RabbitGastrulation2022
lengfei5/RCTD
lengfei5/rnaseq_nf
See the main fork of this repository here >>>
lengfei5/rnaseq_slurm
lengfei5/RPE_aging
lengfei5/scchic-functions
Functions used in downstream scchic analysis
lengfei5/Single-cell-RNAseq-data-analysis-bundle
lengfei5/ST_visium_mice
lengfei5/structuralBreak_test
lengfei5/visium_heart
Spatial transcriptomics of heart tissue