Pinned Repositories
AdjOL
outlier adjustment for RNAseq data
EBSeq
EBSeq: An R package for RNA-Seq Differential Expression Analysis
EBSeqHMM
EBSeq-HMM: A Bayesian approach for identifying expression changes in ordered RNA-seq experiments
Enrich_shiny
R/shiny app for enrichment analysis
gClinBiomarker
OEFinder
Identify ordering effect genes in single cell RNA-seq data
rochedevtools
Tools to make an R developer's life easier
SCPattern
Identify and characterize expression changes in a single cell RNA-seq experiment with ordered conditions
SegReg
SegReg: Breakpoint analysis of time course expression data
WaveCrest
lengning's Repositories
lengning/gClinBiomarker
lengning/EBSeq
EBSeq: An R package for RNA-Seq Differential Expression Analysis
lengning/SegReg
SegReg: Breakpoint analysis of time course expression data
lengning/SCPattern
Identify and characterize expression changes in a single cell RNA-seq experiment with ordered conditions
lengning/OEFinder
Identify ordering effect genes in single cell RNA-seq data
lengning/Enrich_shiny
R/shiny app for enrichment analysis
lengning/EBSeqHMM
EBSeq-HMM: A Bayesian approach for identifying expression changes in ordered RNA-seq experiments
lengning/rochedevtools
Tools to make an R developer's life easier
lengning/WaveCrest
lengning/AdjOL
outlier adjustment for RNAseq data
lengning/allez
Random-set calibration of gene-set statistics
lengning/EACI
lengning/EBSeqHMM-1
This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/EBSeqHMM.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=EBSeqHMM.
lengning/Enrichment-test
Enrichment test based on PCA loadings
lengning/FET
Fisher's exact test wrapper
lengning/gClinBiomarker-templates
Rmarkdown templates for gClinBiomarker
lengning/Heatmap-wrapper
lengning/knitr-examples
a collection of knitr examples
lengning/lengning.github.io
lengning/MultiMod
Identify genes with multiple modes
lengning/MV
Select genes with high mean high variance
lengning/Normalization
Median-by-ratio normalization of RNAseq data
lengning/PCA-wrapper
lengning/RSEM
RSEM: accurate quantification of gene and isoform expression from RNA-Seq data
lengning/Segvis
Package to calculate the histone coverage of a set of genomic regions given a ChIP - Seq experiment
lengning/soxtc_plot1
Internal plotting interface for sox2 tc data
lengning/translatable_paper