Pinned Repositories
3DGolgiCharacterization
Fiji script to calculate Golgi Intensity and volume in 3D
BatchAndConversion
BatchMaxProj
BeadReg
bioformats
Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
BioImageAnalysisToolbox
PPTAnimation2PDF
Split your Powerpoint animation to PDF with each animation on a different page.
lguerard's Repositories
lguerard/PPTAnimation2PDF
Split your Powerpoint animation to PDF with each animation on a different page.
lguerard/3DGolgiCharacterization
Fiji script to calculate Golgi Intensity and volume in 3D
lguerard/bioformats
Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
lguerard/BioImageAnalysisToolbox
lguerard/biop-bash-scripts
Bash scripts to simplify your life (let's hope so!)
lguerard/clij2
GPU-accelerated image processing for everyone
lguerard/ContextDots
A PowerPoint Macro to see the presentation's progress
lguerard/count_3D_objects
lguerard/DoubleStained
lguerard/getPixelValuesMultiChannels
lguerard/git_scripts
Diverse scripts used for Git
lguerard/ijl-utilities-wrappers
Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)
lguerard/ijp-LaRoMe
some useful function to get Label from ROIs and vice versa , and more!
lguerard/ImageJ
Public domain software for processing and analyzing scientific images – a.k.a. ImageJ 1.x
lguerard/imagej.github.io
GitHub Pages for ImageJ
lguerard/LambdaStackKymograph
Kymograph analysis for Lambda stack in ImageJ
lguerard/make_stk_registered_composite
lguerard/MariaGerminalCenterTracking
lguerard/mcib3d-core
mcib3d core library for 3D ImageJ suite
lguerard/multiview-reconstruction
Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data
lguerard/omnipose
Omnipose: a high-precision solution for morphology-independent cell segmentation
lguerard/PowerpointFooterSections
lguerard/ratiometry_fiji_script
lguerard/Stitching
Fiji's Stitching plugins reconstruct big images from tiled input images.
lguerard/StitchIt
Stitching of large tiled datasets
lguerard/SwissBIAS.github.io
Website for the SwissBIAS network: Swiss BioImage Analysts's network
lguerard/TrackMate-StarDist
StarDist detection as TrackMate detectors.
lguerard/vizgen-postprocessing
lguerard/Vortex
Vortex Development
lguerard/vpt-core
Core components of the Vizgen Post-processing Tool