lifs-tools/jmzTab-m

Issues

• Dependency Dashboard

  #40 opened 3 years ago by renovate
  0

• Validator should report an error if instrument defined is never referenced from any ms_run

  #89 opened 2 months ago by nilshoffmann
  0

• Class diagram array types for some objects are incorrect

  #35 opened 4 years ago by nilshoffmann
  0

• Add an external, persistent cache to speed up OLS queries

  #23 opened 4 years ago by nilshoffmann
  1

• Include README.md in maven site

  #27 opened 5 years ago by nilshoffmann
  0

• Validator should issue a warning or even an error if samples are defined but sample_refs are never used in assay

  #33 opened 4 years ago by nilshoffmann
  0

• Semantic validation should not be case sensitive for term prefixes.

  #34 opened 4 years ago by nilshoffmann
  2

• getAssayfor() Optional Column possible correction

  #31 opened 4 years ago by SurajViitk
  2

• Character for seperation of study variables

  #30 opened 4 years ago by SurajViitk
  1

• Add validation step for scan id references

  #26 opened 5 years ago by nilshoffmann
  2

• Validate study_variable name undefined

  #15 opened 5 years ago by nilshoffmann
  0

• Matching cardinality of ambiguity

  #19 opened 5 years ago by sneumann
  2

• Missing JAXB dependency on Java 10

  #18 opened 6 years ago by sneumann
  1

• Build issue with Java 10

  #17 opened 6 years ago by sneumann
  1

• Java 10: java.lang.ClassNotFoundException: com.sun.tools.javac.code.TypeTags

  #20 opened 6 years ago by sneumann
  1

• Update schema and implementation for quantification_value_function -> summarization_method

  #11 opened 6 years ago by nilshoffmann
  0

• Check, whether column order is checked by the parser and validator

  #12 opened 6 years ago by nilshoffmann
  0

• Improve ambiguity_code validation

  #13 opened 6 years ago by nilshoffmann
  0

• Update to schema version 2.0

  #14 opened 6 years ago by nilshoffmann
  0

• CLI semantic validation output is not redirected to outFIle

  #16 opened 6 years ago by nilshoffmann
  0

• Documentation on command-line validation

  #1 opened 7 years ago by sneumann
  0

• webapp file upload broken on non-german setups

  #2 opened 7 years ago by sneumann
  2

• Tests for roundtrip reading and writing

  #5 opened 7 years ago by nilshoffmann
  1

• Provide --version for versioning

  #6 opened 7 years ago by sneumann
  0

• Confusing output: no errors / there were errors

  #7 opened 7 years ago by sneumann
  1

• Should the mzTab writer perform an automatic validation?

  #8 opened 7 years ago by nilshoffmann
  0

• Adapt model, example files and tests to retention_time field updates

  #9 opened 7 years ago by nilshoffmann
  0

• Update Ambiguity_code changes

  #10 opened 6 years ago by nilshoffmann
  1

• Improve generated R code

  #3 opened 7 years ago by nilshoffmann
  0