Pinned Repositories
CAMERA
This is the git repository matching the Bioconductor package CAMERA: Collection of annotation related methods for mass spectrometry data
mtbls2
Development of Arabidopsis dataset for www.ebi.ac.uk/metabolights
mzR
This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data)
mzR-playground
Playground area for the mzR package. The main code repository is now at https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/mzR/
pgchem
Postgres contrib package with OpenBabel for Molecules, Substructures etc.
Rdisop
This is the git repository matching the Bioconductor package Rdisop: Decomposition of Isotopic Patterns
RMassBank
Playground for experiments on the official http://bioconductor.org/packages/devel/bioc/html/RMassBank.html
SemanticMetabolomics
A collection of converters and examples to show how Metabolomics can be a good citizen in Linked-Open-Data
xcms
This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis
xcms-presvnbridge
Tempoary git repo for disruptive changes not yes in XCMS
sneumann's Repositories
sneumann/xcms
This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis
sneumann/mzR
This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data)
sneumann/CAMERA
This is the git repository matching the Bioconductor package CAMERA: Collection of annotation related methods for mass spectrometry data
sneumann/Rdisop
This is the git repository matching the Bioconductor package Rdisop: Decomposition of Isotopic Patterns
sneumann/NMR-ML
sneumann/weizfrag
Test-ground to integrate WeizMass into MetFrag
sneumann/convertmzmlwrapper
This repo contains some local convenience scripts around mzML converision tools
sneumann/MassBank-data
sneumann/BiocManager
CRAN Package For Managing Bioconductor Packages
sneumann/bioconductor.org
Website for bioconductor.org
sneumann/BioHackEU24_preprint
sneumann/bioschemas.github.io
Files for the Bioschemas website.
sneumann/biotoolsRegistry
biotoolsregistry : discovery portal for bioinformatics
sneumann/container
Options for running ProteoWizard applications via containers (e.g. Docker)
sneumann/dataplan
DataPLAN is a Data Management Plan (DMP) generator developed by DataPLANT
sneumann/FAIR-checker
Web tool to assess FAIR principles and promote their implementation
sneumann/ipb-shiny
Template for Shiny Apps with IPB web design
sneumann/metabolights-editor
MetaboLights Online Editor (MOE) is a Single Page Application (SPA) built upon Angular 7, and Redux frameworks. MOE provides MetaboLights users and curators with an intuitive and easy to use interface to create, edit and annotate their studies online.
sneumann/OntoMaton
OntoMaton facilitates ontology search and tagging functionalities within Google Spreadsheets.
sneumann/opentims
Open-source C++ and Python module for opening binary timsTOF data files.
sneumann/pidgraph-notebooks-r
sneumann/plantspec
A tool for spectral analysis of plant stoichiometry
sneumann/PXD019330
ISA-Tab annotation of PRIDE submission PXD019330
sneumann/rdf-config
Describe RDF model and automatically generate SPARQL queries, schema chart, TogoStanza etc.
sneumann/schemas-science.github.io
Webpages for schemas.science which provides specifications (types and profiles) for research digital objects
sneumann/ShinyMzMLConvert
A GUI for different mzML converter tools
sneumann/spCCA
supervised penalized CCA for three data sets (2 biological, 1 design)
sneumann/specifications
Issue tracker, technical wiki, and example markup
sneumann/spectra-hash
The splash, this is the reference documentation
sneumann/Tempo