Limix software

Stegle group

Pinned Repositories

bgen
A BGEN file format reader.
Language:C10 2 152
bgen-reader-py
A BGEN file format reader.
Language:Python10 3 453
CellRegMap
CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq
Language:Python20 3 13
chi2comb-py
Python package for linear combination of independent noncentral chi-squared random variables.
Language:Python11 3 101
glimix-core
Fast inference for Generalised Linear Mixed Models.
Language:Python11 2 126
hcephes
The Netlib Cephes library reformatted for the 21st century.
Language:C5 3 02
limix
Linear mixed model for genomic analyses.
Language:Python99 10 8729
pandas-plink
PLINK reader for Python.
Language:Python77 4 3018
pickle-blosc
Read and write Pickle files using Blosc compression.
Language:Python6 2 01
struct-lmm
Structured Linear Mixed Model is a method to test for loci that interact with multiple environments.
Language:Python13 4 1810

Limix software's Repositories

limix/limix
Linear mixed model for genomic analyses.
Language:Python99 10 8729
limix/pandas-plink
PLINK reader for Python.
Language:Python77 4 3018
limix/CellRegMap
CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq
Language:Python20 3 13
limix/struct-lmm
Structured Linear Mixed Model is a method to test for loci that interact with multiple environments.
Language:Python13 4 1810
limix/chi2comb-py
Python package for linear combination of independent noncentral chi-squared random variables.
Language:Python11 3 101
limix/glimix-core
Fast inference for Generalised Linear Mixed Models.
Language:Python11 2 126
limix/bgen
A BGEN file format reader.
Language:C10 2 152
limix/bgen-reader-py
A BGEN file format reader.
Language:Python10 3 453
limix/chiscore
Test statistics derived from linear combination of chi-squared distributions.
Language:Python4 3 10
limix/chi2comb
Linear combination of independent noncentral chi-squared random variables.
Language:C++3 3 0
limix/optimix
Abstract function optimisation.
Language:Python2 2 0
limix/cbgen
Python wrapper around bgen C library.
Language:Python1 4 123
limix/liknorm
Moments of the product of an exponential-family likelihood with a Normal distribution.
Language:C1 2 0
limix/numpy-sugar
Missing NumPy functionalities.
Language:Python1 3 0
limix/bgen-feedstock
A conda-smithy repository for bgen.
Language:Batchfile2 0
limix/bgen-reader-feedstock
A conda-smithy repository for bgen-reader.
limix/brent-search
Univariate function optimization based on Brent's method.
Language:Python2 0
limix/cbgen-feedstock
A conda-smithy repository for cbgen.
0 0
limix/chi2comb-py-feedstock
A conda-smithy repository for chi2comb-py.
3 0
limix/chiscore-feedstock
A conda-smithy repository for chiscore.
3 0
limix/hcephes-feedstock
A conda-smithy repository for hcephes.
Language:Shell2 0
limix/liknorm-feedstock
A conda-smithy repository for liknorm.
Language:Batchfile2 0
limix/liknorm-py
Liknorm Python wrapper.
Language:Python2 11
limix/liknorm-py-feedstock
A conda-smithy repository for liknorm-py.
Language:Python2 0
limix/limix-sphinx-theme
Sphinx theme to switch code display.
Language:Python2 01
limix/ndarray-listener
Implementation of the Observer pattern for NumPy arrays.
Language:Python2 0
limix/numpy_sugar-feedstock
A conda-smithy repository for numpy-sugar.
2 0
limix/pandas-plink-feedstock
A conda-smithy repository for pandas-plink.
2 0
limix/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
Language:Python1 0
limix/struct-lmm-feedstock
A conda-smithy repository for struct-lmm.
1 0