Pinned Repositories
bgen
A BGEN file format reader.
bgen-reader-py
A BGEN file format reader.
CellRegMap
CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq
chi2comb-py
Python package for linear combination of independent noncentral chi-squared random variables.
glimix-core
Fast inference for Generalised Linear Mixed Models.
hcephes
The Netlib Cephes library reformatted for the 21st century.
limix
Linear mixed model for genomic analyses.
pandas-plink
PLINK reader for Python.
pickle-blosc
Read and write Pickle files using Blosc compression.
struct-lmm
Structured Linear Mixed Model is a method to test for loci that interact with multiple environments.
Limix software's Repositories
limix/lim
Lim is an efficient implementation of Generalized Linear Mixed Models for genomic analysis.
limix/pickle-mixin
Makes un-pickle-able objects pick-able.
limix/limix-core
Fast inference for Linear Mixed Models.
limix/PySnpTools
A Python library for reading and manipulating genetic data.
limix/build-capi
Build and distribute C/C++ static libraries via Python packages.
limix/build-capi-feedstock
A conda-smithy repository for build-capi.
limix/c-progressbar-feedstock
A conda-smithy repository for c-progressbar.
limix/FaST-LMM
Python version of Factored Spectrally Transformed Linear Mixed Models
limix/ggp-poisson-example
Example of PoissonGP
limix/gwas-scan
limix/integration
Out-of-repository limix testing
limix/limix-genetics
Genetic-related tools for Limix.
limix/limix-inference-feedstock
A conda-smithy repository for limix-inference.
limix/limix-interface
limix/limix-util
limix/limix.github.io
Limix software website
limix/progressbar
C library for displaying progress bars on the command line.
limix/starter
A starter site for Jekyll + Prose
limix/travis-tools