lindayqlin

lindayqlin's Stars

• ankidroid/Anki-Android

  AnkiDroid: Anki flashcards on Android. Your secret trick to achieve superhuman information retention.

  Language:Kotlin8.4k2.2k

• wilkox/gggenes

  ➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2

  Language:R48949

• pangenome/odgi

  Optimized Dynamic Genome/Graph Implementation: understanding pangenome graphs

  Language:C++19139

• lh3/pangene

  Constructing a pangenome gene graph

  Language:C1688

• marschall-lab/GFAffix

  GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.

  Language:Rust335

• casper-schutte/fantastic-lamp

  Repository for the FantasticLamp pipeline

  Language:Python61

• lh3/gfatools

  Tools for manipulating sequence graphs in the GFA and rGFA formats

  Language:C20820

• maickrau/GraphAligner

  Language:C++25530

• rrwick/Bandage

  a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

  Language:C++57996

• mlin/gfabase

  GFA insert into GenomicSQLite

  Language:Jupyter Notebook482

• vgteam/vg

  tools for working with genome variation graphs

  Language:C++1.1k193

• asl/BandageNG

  a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

  Language:C++11210

• tewhey-lab/MPRAmodel

  Language:R53

• tewhey-lab/MPRA_oligo_barcode_pipeline

  Language:Perl35

• InfOmics/CRISPRme

  Language:Python2

• YakhiniGroup/crispector

  Accurate estimation of off-target editing activity from comparative NGS data

  Language:Python127

• ashen931/crispresso_downstream

  Language:HTML2

• editasmedicine/uditas

  Software for performing UDiTaS sequencing analysis.

  Language:Python1311

• umasstr/GS-Preprocess

  Language:Shell66

• LihuaJulieZhu/GUIDEseq

  A Bioconductor package for analyzing GUIDE-seq and CIRCLE-seq dataset to identify genome-wide offtargets using genome editing technology CRISPR

  Language:R66

• pinellolab/CRISPResso2

  Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments

  Language:Python26992

• pinellolab/CRISPRlungo

  Genome Editing Analysis of Long UNidirectional sequencing for GenOme Rearrangements

  Language:Python5

• pinellolab/CRISPRme

  Language:Python178