Pinned Repositories
AfterQC
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
anvio
An analysis and visualization platform for 'omics data
clustering-tool-for-nucleotide-sequences-using-Laplacian-Eigenmaps-and-Gaussian-Mixture-Models
Clustering tool for nucleotide sequences using Laplacian Eigenmaps and Gaussian Mixture Models
CodonM
Comparative analysis pipeline of Population's Codon Usage
fastqQC
Data preprpcessing pipeline of raw sequencing data.
plotTree
programing
personal files
r-plot
A simple plot library based on `bash`, `R` mainly `ggplot2` to make the plot easily and flexibly
VirVarDP
Virus variant detection pipeline
XX-Net
接力GoAgent翻墙工具----Anti-censorship tools
lindechun's Repositories
lindechun/r-plot
A simple plot library based on `bash`, `R` mainly `ggplot2` to make the plot easily and flexibly
lindechun/VirVarDP
Virus variant detection pipeline
lindechun/CodonM
Comparative analysis pipeline of Population's Codon Usage
lindechun/plotTree
lindechun/fastqQC
Data preprpcessing pipeline of raw sequencing data.
lindechun/XX-Net
接力GoAgent翻墙工具----Anti-censorship tools
lindechun/AfterQC
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
lindechun/anvio
An analysis and visualization platform for 'omics data
lindechun/clustering-tool-for-nucleotide-sequences-using-Laplacian-Eigenmaps-and-Gaussian-Mixture-Models
Clustering tool for nucleotide sequences using Laplacian Eigenmaps and Gaussian Mixture Models
lindechun/core-genome-alignment
Scripts to analyze gene content and make a concatenated alignment of core genes from bacterial genomes.
lindechun/geoplot
High-level geospatial data visualization library for Python.
lindechun/hangzhouYunQi2017ppt
lindechun/khmer
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
lindechun/LisSero
In silico serotype prediction for Listeria monocytogenes
lindechun/MOST
lindechun/octotree
Code tree for GitHub and GitLab
lindechun/pan-genome-analysis
Processing pipeline for pan-genome visulization and exploration
lindechun/pan-genome-visualization
lindechun/pypeFLOW
a simple lightweight workflow engine for data analysis scripting
lindechun/python-fire
Python Fire is a library for automatically generating command line interfaces (CLIs) from absolutely any Python object.
lindechun/Reseqtools
A Toolkit for analyzing next-generation DNA Re-Sequencing data
lindechun/rice
🍚 A 21 century R console
lindechun/scripts
Miscellaneous scripts
lindechun/seqkit
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang
lindechun/SeqSero
Salmonella serotyping from genome sequencing data
lindechun/SeqSero2
SeqSero2 alpha test
lindechun/serotyping
Scripts for serotyping S. pneumoniae.
lindechun/snp-sites
Finds SNP sites from a multi-FASTA alignment file
lindechun/tensorflow
Computation using data flow graphs for scalable machine learning
lindechun/tensorflow-zh
谷歌全新开源人工智能系统TensorFlow官方文档中文版