Pinned Repositories
bluehead_methylome_bioinformatics
CHSLABmiRNApipeline
Teach using, miRNA-seq analysis pipeline
ctk
CLIP Tool Kit (CTK)
CUTandTAG
Analysis pipeline for CUT&TAG data
dragonstar2019
DryNetMC
Modeling and characterizing dynamic gene regulatory networks underlying cancer drug resistance based on time course RNA-seq data
Escarole
Expression State Clustering on Lineages (Escarole)
GNET2
Gene regulatory network modeling tool (GNET2)
igia
Integrative Gene Isoform Assembler
IsoSeqAPA
Full-length transcriptome construction and Alternative cleavage and PolyAdenylation (APA) analysis by PacBio Isoform Sequencing (Iso-Seq) data
liyangyang12's Repositories
liyangyang12/bluehead_methylome_bioinformatics
liyangyang12/CHSLABmiRNApipeline
Teach using, miRNA-seq analysis pipeline
liyangyang12/ctk
CLIP Tool Kit (CTK)
liyangyang12/CUTandTAG
Analysis pipeline for CUT&TAG data
liyangyang12/dragonstar2019
liyangyang12/DryNetMC
Modeling and characterizing dynamic gene regulatory networks underlying cancer drug resistance based on time course RNA-seq data
liyangyang12/Escarole
Expression State Clustering on Lineages (Escarole)
liyangyang12/GNET2
Gene regulatory network modeling tool (GNET2)
liyangyang12/igia
Integrative Gene Isoform Assembler
liyangyang12/IsoSeqAPA
Full-length transcriptome construction and Alternative cleavage and PolyAdenylation (APA) analysis by PacBio Isoform Sequencing (Iso-Seq) data
liyangyang12/lyy
test
liyangyang12/methylpy
WGBS/NOMe-seq Data Processing & Differential Methylation Analysis
liyangyang12/mirdeep2
Discovering known and novel miRNAs from small RNA sequencing data
liyangyang12/MutaNET
Automated analysis tool for mutations in promoters, transcription factor binding sites, coding regions and protein domains in the context of gene regulatory networks.
liyangyang12/nf-isoseq
Nexflow pipeline for processing PacBio isoseq data
liyangyang12/offYerBackV2
A suite of tools to post process gene regulatory networks.
liyangyang12/PacBio-IsoSeq-Workflow-for-Rice
PacBio IsoSeq Workflow for Rice
liyangyang12/PAS_reference_RData_and_testing_data
Pre-build PAS reference and testing data for APAlyzer
liyangyang12/rnaseq_tutorial
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
liyangyang12/test