lonsbio

Pinned Repositories

bionitio
Demonstrating best practices for bioinformatics command line tools
Language:Shell116 7 5126
biomojify
Convert bioinformatics files to an emoji format.
Language:Python21 1 153
fastqe
FASTQ sequence quality visualisation with Emoji
Language:Python169 6 2317
10_simple_rules_analysis
Python scripts used to produce figures for "'Ten Simple Rules for Writing a PLOS Ten Simple Rules Article"
Language:Python2 3 03
biotool-initial
Template bioinformatics script in various languages based on "Ten recommendations for creating usable bioinformatics command line software" by Torsten Seemann (http://www.gigasciencejournal.com/content/2/1/15)
Language:Python3 2 02
data-shell
Software Carpentry introduction to the shell for novices.
Language:Shell6 4 01
fastqe
Redirection to the new FASTQE repo.
2 1 00
Mighty-Morphin-FASTA-Files
Paper and source for AB3ACBS 2016 presentation: Mighty Morphin FASTA Files
Language:Python3 2 11
Toblerone
Language:Rust4 2 41
TobleroneApp
Desktop app incorporating https://github.com/oshlack/toblerone
Language:JavaScript0 6 00

lonsbio's Repositories

lonsbio/slurm-cluster-vagrant
Vagrant setup for a slurm cluster
Language:Ruby2 2 03
lonsbio/biopy
Bio-file and bio-sequence utility methods
Language:Python2 0
lonsbio/calc
A simple calculator for use in a git tutorial
Language:Python2 01
lonsbio/googlecode2github
Helper scripts and docs for moving a project from Google Code project hosting to Github
Language:Python2 0
lonsbio/lessons
Teaching materials used by the Research Bazaar
Language:Python2 0
lonsbio/python_for_bioinformatics
Some examples of using Python for Bioinformatics
Language:Python2 0
lonsbio/RSEM
RSEM: accurate quantification of gene and isoform expression from RNA-Seq data
Language:C++