A simple tool that lists the samples in all of the AccuCor or Isocor files in a directory.
The intended use is to quickly get a list of all of the samples from all of the peak data files in a given directory to simplify filling out a sample sheet for Tracebase.
pip install git+https://github.com/lparsons/tracebase-sample-list.git
tracebase-sample-list /path/to/accucor/files
Output to STDOUT a tab delimited list with filename
and sample_name
.
Only .xlsx
, .csv.
and .tsv
files are considered.