Pinned Repositories
amplicon_sequencing_pipeline
Pipeline for computing OTU tables from 16S or ITS amplicon sequencing data.
AnHyDeg
Database of anaerobic hydrocarbon degradation genes used for functional gene searching of metagenome data sets
fargene
fastx_toolkit
FASTA/FASTQ pre-processing programs
linux-command
Linux命令大全搜索工具，内容包含Linux命令手册、详解、学习、搜集。https://git.io/linux
megahit
MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
Metagenome
Metagenome analysis pipeline
metaWRAP
MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis
MMseqs2
MMseqs2: ultra fast and sensitive search and clustering suite
MyPaper-Visualization-Code
This repository provides Visualization Codes for published article charts
luanxiao's Repositories
luanxiao/AnHyDeg
Database of anaerobic hydrocarbon degradation genes used for functional gene searching of metagenome data sets
luanxiao/fastx_toolkit
FASTA/FASTQ pre-processing programs
luanxiao/amplicon_sequencing_pipeline
Pipeline for computing OTU tables from 16S or ITS amplicon sequencing data.
luanxiao/fargene
luanxiao/linux-command
Linux命令大全搜索工具，内容包含Linux命令手册、详解、学习、搜集。https://git.io/linux
luanxiao/megahit
MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
luanxiao/Metagenome
Metagenome analysis pipeline
luanxiao/metaWRAP
MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis
luanxiao/MMseqs2
MMseqs2: ultra fast and sensitive search and clustering suite
luanxiao/MyPaper-Visualization-Code
This repository provides Visualization Codes for published article charts
luanxiao/NCyc
luanxiao/Note
luanxiao/Prodigal
Prodigal Gene Prediction Software
luanxiao/Python-100-Days
Python - 100天从新手到大师
luanxiao/qiime2
Official repository for the QIIME 2 framework.
luanxiao/Shell-for-readfq
A script which use to statistic the number of reads in the fastq file
luanxiao/SOAPdenovo2
Next generation sequencing reads de novo assembler.
luanxiao/Structural-Equation-Modeling-SEM
Source code to evaluate how the factors take part in ARGs or microbial community profile
luanxiao/Ublastx_stageone_v2018
This is the source code for multisamples ARGs profiling using SARG2.0 database
luanxiao/VPA-and-GGplot2
This code provides an pipeline for VPA analysis and CCA graph visualization