Pinned Repositories
3000web
5years
AD_phageDiscovery
apple_diploid_genomes
auto-whu-openwrt
可以用于OpenWrt路由器的武汉大学校园网自动认证工具，适用于锐捷ePortal网页认证
bacterial_GWAS_tutorial
Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop
bGWAS
R package to perform Bayesian Genome-Wide Association Studies
bioinformatics-100-days
Learn and practice the bioinformatics skills in 100 Days.
kmersGWAS
A library for running k-mers based GWAS
VIP
lungphage's Repositories
lungphage/AD_phageDiscovery
lungphage/bioinformatics_pipeline
Bioinformatics Pipeline
lungphage/bioinformatics_tutorials
tutorials
lungphage/chaoxing-sign-cli
超星学习通签到，Nodejs脚本。支持普通签到、手势签到、位置签到、二维码签到。
lungphage/coding-interview-university
A complete computer science study plan to become a software engineer.
lungphage/EasyMicrobiomeR
Using R language in microbiome analysis
lungphage/GeneLab_Data_Processing
lungphage/hecatomb
hecatomb is a virome analysis pipeline for analysis of Illumina sequence data
lungphage/jcvi
Python library to facilitate genome assembly, annotation, and comparative genomics
lungphage/JMAG_JVD
This is a repository of the codes used in the Tomofuji et al (prokaryotic and viral genomes recovered from 787 Japanese gut metagenomes revealed microbial features associated with diets, populations, and diseases).
lungphage/kmcp
Accurate metagenomic profiling && Fast large-scale sequence/genome searching
lungphage/kover
Learn interpretable computational phenotyping models from k-merized genomic data
lungphage/MTD
MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data
lungphage/myscripts
lungphage/PhenotypeSeeker
Identify phenotype-specific k-mers and predict phenotype using sequenced bacterial strains
lungphage/pic_online
图床
lungphage/PRGC
Comprehensive catalogs for microbial genes and metagenome-assembled genomes of the swine lower respiratory tract microbiome
lungphage/pytorch-beginner
pytorch tutorial for beginners
lungphage/qazwsx1995.github.io
lungphage/RNA_virus_detector
VirBot: a protein-based RNA virus detector for metagenomic data
lungphage/scipy
Scipy library main repository
lungphage/SOVAP
The Soil Virome Analysis Pipeline (SOVAP) is designed to process, analyze, and annotate viromics and metagenomics data using cutting-edge tools, providing valuable insights into the virome and microbial communities found in complex environments, such as soil ecosystems.
lungphage/SOVAP_Soil_dsRNA
Supporting code for manuscript: Soil dsRNA Viromics
lungphage/Sus_Liver_eSTRs
Mapping short tandem repeats for liver gene expression traits help to prioritize potential causal variants for complex traits in pigs
lungphage/Useful_scripts
lungphage/V-pipe
V-pipe is a pipeline designed for analysing NGS data of short viral genomes
lungphage/vip-1
Variable Importance Plots (VIPs)
lungphage/viralrecall
Detection of NCLDV signatures in 'omic data
lungphage/ViWrap
A wrapper to identify, bin, classify, and predict host-viral relationship for viruses
lungphage/woltka
Web of Life Toolkit App