lwaldron
I teach biostatistics, develop for Bioconductor, and have an active research program in cancer genomics and in metagenomic profiling of the human microbiome.
The @waldronlab at the City University of New YorkNew York, NY
Pinned Repositories
bioc2015multiomicsworkshop
Challenges and opportunities from integrative analysis of multi-omic data sets
ccleWrap
Wrapper for importing CCLE data into Bioconductor
H-HybridCE
Hybrid Course Engagement data analysis
LeviRmisc
Miscellaneous handy functions
RBootcamp2015
Materials for the Hunter / CUNY School of Public Health R Bootcamp 2015
lwaldron's Repositories
lwaldron/annotate
lwaldron/anvil-portal
The front-facing AnVIL user portal
lwaldron/awesome-microbes
List of computational resources for analyzing microbial sequencing data.
lwaldron/BioC2020_DelayedArray_workshop
https://petehaitch.github.io/BioC2020_DelayedArray_workshop/
lwaldron/bioc2020workshop
Workshop submission for Bioc2020
lwaldron/BioC2021
BioC2021: Where Software and Biology Connect
lwaldron/BioC2022
BioC2022 conference material
lwaldron/BiocChallenges
Challenges for the Biocoductor community.
lwaldron/bios1
Miscellaneous code for CUNY Biostatistics I
lwaldron/BIRSBIO2020.seqFISH.SpatialAnalysis
lwaldron/BuildABiocWorkshop2020
Template for building a bioconductor workshop package using github actions
lwaldron/bulker
Manager for multi-container computing environments
lwaldron/cocoa_workshop_bioc2020
lwaldron/crc-subtyping-paper
lwaldron/CRISPRseekGUIDEseqBioc2020Workshop
Design target-specific gRNAs for CRSIPR genome editing system including base editor and prime editor using CRSIPRseek and GUIDEseq
lwaldron/curatedOvarianData
lwaldron/EpiForBioWorkshop2020
lwaldron/EuroBioc2020
European Bioconductor Conference, December, 2020
lwaldron/freadmem
testing memory usage of data.table::fread
lwaldron/GenomicSuperSignature
Interpretation of RNAseq experiments through robust, efficient comparison to public databases
lwaldron/MicroBioMap
lwaldron/oilabs-tidy
lwaldron/Oral-stool-introgression
lwaldron/padma
Pathway deviation scores using multiple factor analysis
lwaldron/PCAworkshop
A introduction to PCA in R
lwaldron/rnw2rmd
lwaldron/SpatialExperiment
lwaldron/sweave2rmd
A project for converting Bioconductor Sweave documents to Rmd
lwaldron/testpackage
This is a test
lwaldron/testrepo