Pinned Repositories
academic-kickstart
Aphid_AL4_chromosome_assembly
The analytical pipeline of the AL4 strain genome
bee_gut_bacteria
cds2aa
Translate coding sequences to amino acid sequences
codon_alignment
Codon-based alignment for CDS sequences
conspecifix_arbovirus
Scripts used to produce ConSpeciFix analysis for arboviruses
epps_nf
eDNA pipeline showcase
Mitochondrial_nuclear_gene_evolution_in_arthropods
The analytical pipeline for estimating gene family evolutionary rate and gene family size changes in arthropod genomes.
Psyllid_chromosome_assembly
Scripts used for the chromosome-level genome assembly of the hackberry petiole gall psyllid (Pachypsylla venusta)
Relative-Rate-Test
Tajima Relative Rate Test Of Molecular Clock
lyy005's Repositories
lyy005/codon_alignment
Codon-based alignment for CDS sequences
lyy005/Mitochondrial_nuclear_gene_evolution_in_arthropods
The analytical pipeline for estimating gene family evolutionary rate and gene family size changes in arthropod genomes.
lyy005/Aphid_AL4_chromosome_assembly
The analytical pipeline of the AL4 strain genome
lyy005/cds2aa
Translate coding sequences to amino acid sequences
lyy005/epps_nf
eDNA pipeline showcase
lyy005/Relative-Rate-Test
Tajima Relative Rate Test Of Molecular Clock
lyy005/Psyllid_chromosome_assembly
Scripts used for the chromosome-level genome assembly of the hackberry petiole gall psyllid (Pachypsylla venusta)
lyy005/academic-kickstart
lyy005/bee_gut_bacteria
lyy005/conspecifix_arbovirus
Scripts used to produce ConSpeciFix analysis for arboviruses
lyy005/Build_SAP_local_reference
Script to build SAP (Statistical Assignment Package) local reference from NR database
lyy005/DMS_MaPseq_pipeline
lyy005/eBUG
Evolutionary Bioinformatics Undergraduate Group
lyy005/epps
This is for running the eDNA pipeline in the pfrender lab
lyy005/Intro_Biocom_ND_319_Tutorial10
lyy005/Intro_Biocom_ND_319_Tutorial11
lyy005/Intro_Biocom_ND_319_Tutorial12
lyy005/Intro_Biocom_ND_319_Tutorial4
Tutorial 4
lyy005/Intro_Biocom_ND_319_Tutorial5
lyy005/Intro_Biocom_ND_319_Tutorial6
lyy005/Intro_Biocom_ND_319_Tutorial7
lyy005/Intro_Biocom_ND_319_Tutorial8
lyy005/Intro_Biocom_ND_319_Tutorial9
lyy005/lyy005.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
lyy005/Mitochondrial_Protein_Coding_Gene_Annotation
lyy005/organdiet
Metagenomics pipeline for human diet analysis using organelles genomes
lyy005/peptidoglycan_related_genes_in_basal_aphids
Comparative genomics of eight aphid subfamilies reveals variable relationships between host horizontally-transferred genes and symbiont peptidoglycan metabolism
lyy005/threshold_correction_for_eDNA
lyy005/TotiEVEs
lyy005/VGSC
Transcriptome assembly and sodium channel gene annotation