m-crown

m-crown's Stars

• apeterswu/Awesome-Bio-Foundation-Models

  A collection of awesome bio-foundation models, including protein, RNA, DNA, gene, single-cell, and so on.

  16710

• helicalAI/helical

  This repository contains the python package for Helical

  Language:Python767

• Bashton-Lab/ProCogGraph

  Graph based ligand-domain interaction database for exploring and mining domain-cognate ligand interactions.

  Language:Python5

• TheBreakingGoodProject/ELN-Templates

  22

• shenwei356/csvtk

  A cross-platform, efficient and practical CSV/TSV toolkit in Golang

  Language:Go1k85

• pachterlab/BI-BE-CS-183-2023

  Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023

  Language:Jupyter Notebook46172

• lskatz/awesome-bioinformatics-jobs

  Resources for bioinformatics jobs

  362

• steineggerlab/foldcomp

  Compressing protein structures effectively with torsion angles

  Language:C++16314

• BorgwardtLab/proteinshake

  Protein structure datasets for machine learning.

  Language:Python10410

• sib-swiss/training-collection

  Collection of bioinformatics training materials

  Language:Python991183

• afshinea/stanford-cs-229-machine-learning

  VIP cheatsheets for Stanford's CS 229 Machine Learning

  17.8k4k

• exaloop/codon

  A high-performance, zero-overhead, extensible Python compiler using LLVM

  Language:C++15.3k524

• whitead/dmol-book

  Deep learning for molecules and materials book

  Language:Jupyter Notebook629121

• kyclark/command-line-rust

  Code for Command-Line Rust (O'Reilly, 2024, ISBN 9781098109417)

  Language:Rust1.6k265

• jenniferlu717/Bracken

  Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.

  Language:C++29750

• lskatz/fasten

  :construction_worker: Fasten toolkit, for streaming operations on fastq files

  Language:Rust776

• m-crown/SPEAR

  Systematic ProtEin AnnotatoR

  Language:Python19

• Wytamma/GISAIDR

  Programmatically interact with the GISAID database.

  Language:R729

• dspinellis/latex-advice

  Advice for writing LaTeX documents

  Language:TeX1.2k122

• plasma-umass/scalene

  Scalene: a high-performance, high-precision CPU, GPU, and memory profiler for Python with AI-powered optimization proposals

  Language:Python12.3k402

• brentp/vcfanno

  annotate a VCF with other VCFs/BEDs/tabixed files

  Language:Go36756

• lh3/seqtk

  Toolkit for processing sequences in FASTA/Q formats

  Language:C1.4k307

• lh3/readfq

  Fast multi-line FASTA/Q reader in several programming languages

  Language:C17459