maartenmennes/ICA-AROMA

classification_plots matplotlib error

Virginiaconde opened this issue · 3 comments

Virginiaconde commented

Hi all,

I'm having trouble running ICA-AROMA when it comes to the plot generation part. The first part (motion component identification) runs smoothly and I get an output of how many components have been classified as motion-related components. However something seems to go wrong with the classification_plots.py and matplotlib.

This is the error:

"Found 15 head motion-related components in a total of 41 components.
Traceback (most recent call last):
File "/ifs/loni/faculty/thompson/four_d/TBI_all/NTNU/data_analysis/ICA-AROMA-master/ICA_AROMA.py", line 226, in
outDir)
File "/ifs/loni/faculty/thompson/four_d/TBI_all/NTNU/data_analysis/ICA-AROMA-master/classification_plots.py", line 141, in classification_plot
s=sizemarker)
File "/usr/local/python-2.7.8/lib/python2.7/site-packages/matplotlib/axes/_axes.py", line 3635, in scatter
collection.update(kwargs)
File "/usr/local/python-2.7.8/lib/python2.7/site-packages/matplotlib/artist.py", line 757, in update
raise AttributeError('Unknown property %s' % k)
AttributeError: Unknown property data"

I have already upgraded matplotlib (within a virtualenv - I'm working from a server), but it doesn't seem to work.

Any advice will be greatly appreciated, thanks!
Virginia

maartenmennes commented

Hi Virginia,

have you solved this problem? It is very hard to troubleshoot for me from this end, as it is a matplotlib error, not an AROMA error. All I can say is that it works fine for me on python2.7 (2.7.14) and matplotlib version 2.1.0

Maarten

maartenmennes commented

ps. note that you can run classification_plots.py outside of the AROMA main script:

python2.7 ~/Scripts/ICA-AROMA/classification_plots.py -in classification_overview.txt

Virginiaconde commented